Sarcophilus harrisii (Tasmanian devil): 100934314
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Entry
100934314 CDS
T02286
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100934314
03015 mRNA surveillance pathway
100934314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100934314
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100934314
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100934314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100934314
NCBI-ProteinID:
XP_031805844
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All DBs
Position
2:complement(39011815..39049755)
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AA seq
600 aa
AA seq
DB search
MMTPASRCLEVWLPPPGGEGICSPGEQGGGGLWGSDWALPPMGLSCSPRSEAGQVSSRCL
PQGPAAFEGPSLVLIGCPNPSSISPANDSLLHNWTLPRVTVGAAVTATAQGGTVEAMAGR
SGRARGRALGLFSLALPVGDLSNLHLKEDRVKPDTNGTIVKSNENVEKTDEEEKEDRAAQ
SLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQ
ENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPLNRYPQCLCLSPTYELALQTG
KVIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVF
VLDEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEDSVWKFARKVVPDPNIIKLKR
EEETLDTIKQYYVMCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTAGWLAAELSKEGHQ
VALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPD
NETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIDRLDTDDLDEIEKIAN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgatgactccagcttccaggtgtttagaagtgtggttgccaccacctgggggagaagga
atctgcagccctggggagcagggtgggggtggcctttgggggtctgactgggctctgcca
cccatgggcctctcttgctcccccaggtcggaggctggccaagtctcctcaagatgtcta
ccccaaggaccagctgcttttgagggcccttccctggtcctgattggctgtcccaaccca
tcctccatctccccagccaatgacagcctcctccacaactggaccctacccagggtgaca
gttggagctgctgtaactgccactgcccaggggggaactgtggaggccatggccggcagg
agtggccgagcccggggccgtgccctgggcctcttctctctggccctgcctgtgggggac
ttgagcaacttacatctgaaggaagacagagtcaaaccagataccaatggtactattgtg
aaatccaatgaaaatgtagaaaagacagatgaggaggagaaagaggatagagctgcccag
tcattgctaaataaactgatcagaagcaatcttgttgacaacacaaatcaagtagaagtc
ctacaacgggatccaaattcccctctctattcagtgaagtcttttgaagaacttcgactg
aaacctcagcttctacaaggagtctatgctatgggtttcaaccgaccatctaaaatacaa
gaaaatgcattacctatgatgcttgctgaacccccacagaacttgatcgctcagtctcag
tccggtactggtaaaacagctgcatttgtcctggctatgcttagccaagtggaacctttg
aacagatacccccagtgtttgtgcctctcaccaacttatgagctcgcacttcagacagga
aaggtgattgaacagatgggcaaattttatccagaacttaaacttgcttatgctgttcga
ggcaataaattagaaagaggccagaagatcagtgagcagattgtgattggtactcctggc
accgtcctggattggtgctccaagctgaaattcattgaccccaagaagatcaaggtgttt
gttctggatgaagctgacgtaatgatagccacgcaaggccatcaggatcagagtatccgt
atccagaggatgctccctaaggattgtcagatgctgcttttctctgctacctttgaagat
tctgtgtggaaatttgcacgaaaagttgtcccagacccaaatatcatcaaactgaaacga
gaagaagagacattggacaccattaaacagtattatgtgatgtgcaataatcgagatgag
aagtttcaagccctttgtaatctctatggggccatcacaattgctcaagccatgatcttc
tgtcatacccgcaaaacagctggttggctggcagctgaactgtccaaagaaggccaccag
gtggccctcctgagtggtgaaatgatggtggaacagagagctgcagtgattgagcgtttc
cgagagggcaaggaaaaagtgttggtgaccaccaacgtgtgtgctcgaggtatcgatgtt
gaacaggtgtctgtggttatcaactttgacctgcctgtggacaaggatgggaatccagac
aacgagacataccttcatcggatcgggcgtacggggcgctttggcaagcggggcctggcc
gtgaacatggtggacagcaagcacagcatgaacattctcaacagaatccaagagcatttc
aataagaagattgacagattggacacggatgatttggatgagattgagaaaatagccaac
tga
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