Sarcophilus harrisii (Tasmanian devil): 100934417
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Entry
100934417 CDS
T02286
Symbol
ARVCF
Name
(RefSeq) LOW QUALITY PROTEIN: armadillo repeat protein deleted in velo-cardio-facial syndrome
KO
K28154
splicing regulator ARVCF
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shr03041
]
100934417 (ARVCF)
Spliceosome [BR:
shr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100934417 (ARVCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
100934417
NCBI-ProteinID:
XP_031804860
LinkDB
All DBs
Position
1:complement(710413634..710670441)
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AA seq
1363 aa
AA seq
DB search
MDDYDIRSAASILASVKEQEARFERLTRALEEERRNVSLQLERAHQPCEQPRASTCAIGN
GQPLATAWQQLVLQEQSPGNQTSLAMMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGT
TRRTETKVTKMVKTVTTRTVRQVPLGPDGLPLLDGSPPLGSYTDSIDRRYLKNGERFLPP
QASSTLTRSYNSYGEGPDGPYRPFHAHDASAGYGGAELPDGYGSLSRGVGYRPRYAYVPG
GGYRPEEGSYTLPGRREAYGPPGAQPQAPPVGSGPDLAGGGRSQPERFQPEPYGLEDDNR
SLGVDDEGYELDPDYSTVNRRLPVGVPERGRPHKGRAYEEPSESEMIDERIPYVHGGYAA
PLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQ
HLCYENDKIKKDVRHLKGIAILVGLLDHPKAEVHRRACGALRNISYGRDHENKVAIKGCD
GIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIVPHSGWESE
PNEDSKPRDAEWTTVFKNTSGCLRXGRRGPLRHSLRVPPSTPAAPTSSPGLRVIPRTHRV
FGIVGRHGSPAIIHSQAFIHLDLTQQAPHALGRGPGFRVVSGMFLSASRGRPLPLGPPWP
GLRGGSMCDGKSRAGLRAWPRAGPCCPSSWAEGAGAAAVLQGQDLRPAQPFGASGSENTL
SRDLREKGNVPSLLPGGPGELPRATAWCSGHSGPWNGQSGTGAVPFPGPGNLALEWIKAR
QPSASQRPGGVTRIPCSPQGWLRWGAQKGPRECDGLVDALLHALQSAIGKKDTDNKVMMP
CNLGLVGGQGDRPTAGLLWVRGLYREEDRKSSRDQSISRHPFIKHLLCASIRETKKGKTV
TPGLQRYPGRGGTDGLEPPLGIRLGPESRVLVFLYGIQQNQERKGNVGRRFRGLTSTQGP
AGRQPGRPRKKDDASCFGSKKAKEDWFSQGKKNGGVDRNFDTLDLPKRSESAKGFELLYQ
PEVVRLYLSILTESQNFNTLEAAAGALQNLSAGTWMPPAGRGGWGRPGPAACGRGHSQGA
GPTWAPCVAPWGGSAPPPARPRLCSQECDVAVGAGAGAAFGGSREGPLRPPRPRPSLTRS
PWKGLTARAPAGSYAMAELVRNLPSRQQRTAKNLEEDTVVAVLNTIHEIITDSAENARSL
VQTQGIQKLVGIGKSSPSMRETKAASHVLQMVWSYKELRGALQKDGWNKAHFQSAASTPP
KGSKGTSGKPSYDDSTLPLVEKTHDERCGSRDMIPMDELGPDGYSTIDHRERKYRAGDPA
GDASEKEPLKTDPARKPPHRSNRASVNLVDSRDPKPPPVDSWV
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacgacatccgatcggccgccagcatcctggcctcggtcaaggagcaggag
gcgcgctttgagcgcctgacgcgggccctggaggaggagcggcggaacgtgtccctgcag
ctggagcgggcgcaccagccctgcgagcagcctcgggccagcacgtgcgccattggcaac
gggcagccgctggcgacggcctggcagcagctggtgctgcaggaacaaagtccaggcaac
cagacgtccctggcaatgatgcaggagccccaggagatggtggaggagacggtgaccgtg
gaggaagatcccggcacgcccacgtcgcacgtgtccatcgtcacgtccgaggatgggacc
accaggaggacggagaccaaggtcaccaagatggtgaagacggtgaccacgaggacggtg
cgccaggttccgctgggccccgacgggctcccgctcctggacggctcgccccccctgggc
agctacaccgactccatcgaccggcggtacctgaagaacggcgagcgcttcctcccgccc
caggcctcctccaccctgacccgctcctacaacagctacggcgagggccccgacgggccc
taccgccccttccacgcccacgacgccagcgccggctacgggggcgccgagctgcccgac
ggctacggcagcctgtcccgcggggtgggctaccggccccgctacgcctacgtccccggg
ggcggctaccggcccgaggaggggagctacaccctgcccggccgcagggaggcctacggg
ccgcccggggcccagccccaggcgccccccgtgggcagcggccccgacctcgccgggggc
ggccgctcccagcccgagaggttccagcccgagccctacgggctggaggacgacaacagg
agcctgggcgtggacgacgagggctacgagctggacccggactactccactgtgaaccgg
cggctgcccgtgggggtccccgagagaggccggccgcacaagggcagagcctacgaggag
ccatccgaaagcgagatgatcgacgagcggatcccctacgtccacggcggctacgccgcc
ccactggcgcagcccgagaggggcagcatggccagcatcgaccgcctgggcaagcgttcc
ccctccatcgacagcatccgcaaggaccctcggtggcgggacccggacctgccggaggtg
atcgccatgctcagccaccccatcgaccccgtcaagtccaacgcggccgcctacctgcag
cacctgtgctacgagaacgacaagatcaagaaggacgtgcgccacctgaagggcatcgcc
atcctggtggggctgctggaccaccccaaggccgaggtgcaccggcgcgcctgcggcgcc
ctgcgcaacatctcctacggccgcgaccacgagaacaaggtggccatcaaaggctgcgac
ggcatccccgccctcatccgcctcctgcgcaagaccaacgacatggaggtgcgggagctc
atcaccgggaccctgtggaacttgtcttcctacgagcccctcaaaatggtcatcatcaac
catggcctgcagaccctgaccaacgaggtgatcgtcccccactcaggctgggagagcgag
cccaacgaggactccaagcccagagatgccgagtggaccacggtcttcaagaacacttca
gggtgcctcaggtaaggccggagggggcccctccggcacagcctgcgtgtgccgccttcc
acccccgcggcccccacttcctcccccggcctgagggtcataccccgaacccaccgtgtc
tttggcatcgttggccgtcatggctccccagccatcatccactcccaggccttcattcat
ctcgaccttacccagcaggcacctcatgccttggggcgagggccaggtttccgggtggtg
agcgggatgttcctctcagcctcccgagggcggcccctgcccctgggcccaccctggccg
ggcctccgaggagggagcatgtgcgatggaaagagccgggctggccttcgagcgtggcct
cgtgctgggccctgctgcccaagctcttgggcagagggagctggtgctgctgcggtgctg
caaggacaggatttaaggccggcccagccctttggagcatcagggtcagaaaataccttg
tcacgagacctgagggaaaagggcaatgtcccctcactgctgcccgggggccctggggaa
ctgcccagggccacagcctggtgctcggggcactcgggtccttggaatgggcagtcgggc
acaggggccgtacccttccctggcccagggaacctcgccttggagtggattaaagccaga
cagccgtcggcttcccagaggcccggtggggtgaccagaatcccttgctctccccagggc
tggctcagatggggggcccaaaaggggcctcgggagtgtgacgggctggtggatgctctt
cttcacgccctgcagtccgccatcggcaagaaagataccgacaacaaggtgatgatgcca
tgcaacttggggctcgtggggggccagggtgaccgcccgaccgcagggctcctttgggtc
aggggtctctacagggaagaggacaggaaatccagtagagatcagtcgatcagtcgccat
ccatttattaagcacctactgtgtgcaagcatcagggaaaccaaaaaaggcaaaactgtc
acccctggcctccagaggtacccgggaaggggtgggactgatggccttgagcctccccta
ggcatccgccttggtcctgagagcagggttcttgtattcctgtacgggattcagcagaac
caagagcgaaaggggaacgttgggaggaggttccggggcctgacaagtacccagggcccg
gccggccgccagccggggcgccccaggaagaaggacgacgccagctgtttcgggagcaag
aaagccaaagaggattggttcagtcaaggaaaaaagaacggaggcgtggacaggaacttc
gacaccctcgacttgcccaagagatcggagtctgctaaaggcttcgagctgctctaccag
ccggaggtggtccgtctctacctgtccatcctcaccgagagccagaacttcaacaccctg
gaggccgcggcgggggcgctgcagaacctgagcgcgggcacctggatgcctccagctggg
cgcggtgggtggggcaggcccggtccggctgcgtgtgggcggggccactcccagggggcg
ggccccacgtgggctccgtgtgtggccccgtggggggggtctgcgcctcccccggcccgc
ccccggctctgcagccaggagtgcgacgttgccgtcggcgccggggcaggggcagctttc
gggggctcccgggagggcccccttcgccccccccgcccccgcccctccctgacccggagc
ccgtggaaggggttaacggcgcgggcccccgcagggagctacgccatggccgagctggtg
cggaacctgccgagccggcagcagcgcacggccaaaaacctcgaggaggacacggtggtc
gccgtgctgaacaccatccacgagatcatcacggacagcgccgagaacgcccgctcgctg
gtgcagacgcagggcatccagaagctggtgggcatcggcaagtcgagcccgtccatgcgg
gagacgaaggcggcgtcccacgtcctgcagatggtctggagctacaaggagctgcggggg
gccctgcagaaggacggctggaacaaggcccacttccagtcggcggcttccacccccccc
aagggctccaaagggacttcgggcaagcccagctacgacgacagcacgctgcctctagtg
gaaaagacccacgatgagaggtgtgggagccgcgatatgatccccatggatgaactcggc
ccagatggctactccaccatcgaccatcgggagcggaagtaccgcgctggggaccctgcg
ggcgacgcctctgagaaggagcctttgaaaacagacccggctagaaagcccccccacagg
agtaaccgggcctcggtgaatctggtggacagccgggaccccaagccaccgcccgttgac
tcctgggtctag
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