Sarcophilus harrisii (Tasmanian devil): 100934581
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Entry
100934581 CDS
T02286
Symbol
SNTB1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04820
Cytoskeleton in muscle cells
shr05410
Hypertrophic cardiomyopathy
shr05412
Arrhythmogenic right ventricular cardiomyopathy
shr05414
Dilated cardiomyopathy
shr05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100934581 (SNTB1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100934581 (SNTB1)
05412 Arrhythmogenic right ventricular cardiomyopathy
100934581 (SNTB1)
05414 Dilated cardiomyopathy
100934581 (SNTB1)
05416 Viral myocarditis
100934581 (SNTB1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
100934581
NCBI-ProteinID:
XP_031803012
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Position
1:complement(606850760..607161085)
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AA seq
567 aa
AA seq
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MAVAAAAAAAAASAAPTGGGGCRGQRSGLLEVLVRDRWYKVLVNLNEDALVLSSEEGSGA
YNGVGGGGGGTSNGSFCRSAGGGAGGHGPGGPGVGGGAGSGNQSLDTPVPSGGSSPQVGV
RTAFTDLPDQVPESIANQKRGVKVLKQELGGLGISIKGGKENKMPILISKIFKGLAADQT
QALYVGDAILSVNGADLRDATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPVSEIG
WETPPPESPRLGSTNSDPLSPLPLSFHRDKKCIPLKMCYVTRNMALNDPEDRHLEIHSPD
AKHTVILRSKDSATAQAWFNAIHANASDLLTKVIAEVKEQLGKSGIPGSREIRHLGWLAE
KVPGENEKNWKPALVMLTEKDLLIYDSMPRIKEAWFSPVHTYPLLATRLVHSGPGKGSLQ
SGVDLSFATRTGTRQGIETHLFRAETSRDLSQWTRSIVQGCHNSAELITEITTSCTYKNQ
ECRLTIHYEHGFSITTEPQEGAFPKTIIQAPYEKLKMSSDDGIRMLYLDFGGKDGEIQLD
LHSCPKPIVFIIHSFLSAKITRLGLVA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagcagcagcagcagcagcagcagcagcttcggcagcgccgactgggggaggc
ggctgccgggggcagcggagcgggctgctggaagttttggtgcgggaccgctggtacaaa
gttctggtgaacttgaacgaggacgccctggtcctgagcagcgaggagggctccggagct
tacaacggcgtcgggggcggcggcggcggaacctccaatggctctttctgccgaagcgca
ggcggtggggctggtggtcacggccccgggggtcccggggtcggtggcggggctggaagc
gggaaccagtccctggacacccctgtaccctctggagggagcagcccccaagtgggcgtc
cgcactgccttcactgacctgccagaccaagtgcccgaatctatcgccaaccagaagcgg
ggcgtgaaggtgctcaaacaggagctcgggggactgggcattagcatcaaagggggcaaa
gaaaacaaaatgcccatcctcatcagcaagattttcaaggggcttgcagcagatcagacc
caggccctctacgtaggggacgcgatcctgtcagtgaatggagccgacctgagggacgcc
acccacgatgaggcggttcaagcgctcaaacgagccggtaaagaggtgttgttggaagtg
aagtacatgcgagaagcaactccctacgtgaaaaagggttctccagtatcagagattggg
tgggagactcccccacccgaatccccgagattaggaagcaccaactcagatccactctca
ccactccccctctcctttcaccgagacaaaaaatgcatcccgctcaaaatgtgctacgtg
actcgaaacatggctctgaatgaccccgaagacagacatcttgaaatccattcacctgac
gctaagcacactgtcatcctgcggagcaaagattcagccacagcccaggcatggttcaat
gccatccatgccaatgctagcgatctgcttacaaaggtcatcgcagaggtcaaagagcag
ctggggaaaagtggaattcctgggagccgagagatcagacatctaggctggcttgcagag
aaggtgccaggagaaaatgagaagaactggaagccagccttggttatgctgactgagaag
gacctcttaatctatgacagcatgccacggataaaggaagcctggttcagccctgttcat
acataccctctgttagctaccagattggtccattcaggtcctggcaaaggatcactgcag
tctggggtggatctgtcctttgcaactaggactggtaccaggcaaggaattgaaacccat
ctcttcagagctgagaccagcagggacctttctcagtggacaagaagcatcgttcagggc
tgccataactcagcagaactcataactgaaatcaccacctcatgcacatacaaaaaccaa
gagtgccgtctgaccatacattatgagcatggattctccatcaccactgagccacaggag
ggtgccttccccaagacaattattcaggctccttatgaaaagctcaaaatgtcttcagat
gatgggatcaggatgctttatttagattttggcggaaaggatggagagattcaattagat
cttcactcctgtcccaaacctattgtattcatcattcattccttcttgtcagctaaaatt
acaaggcttgggttggtggcgtga
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