Sarcophilus harrisii (Tasmanian devil): 100934677
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Entry
100934677 CDS
T02286
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04010
MAPK signaling pathway
shr04020
Calcium signaling pathway
shr04713
Circadian entrainment
shr04925
Aldosterone synthesis and secretion
shr04927
Cortisol synthesis and secretion
shr04929
GnRH secretion
shr04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100934677 (CACNA1H)
04020 Calcium signaling pathway
100934677 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100934677 (CACNA1H)
04925 Aldosterone synthesis and secretion
100934677 (CACNA1H)
04927 Cortisol synthesis and secretion
100934677 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
100934677 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100934677 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shr04040
]
100934677 (CACNA1H)
Ion channels [BR:
shr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100934677 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
100934677
NCBI-ProteinID:
XP_031801612
Ensembl:
ENSSHAG00000011697
LinkDB
All DBs
Position
1:343476695..343871260
Genome browser
AA seq
2496 aa
AA seq
DB search
MTDGERKQPLQPLASDEVRVPIASVQAAQPGEEEEEDAASGSKSLQGSVASGASSARERE
LERECAPEPEPEPEPKPAPEPEPEQEPEPELGAADEEQVPYPALAATVFFCLKQTSRPRS
WCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCEDVECQSERCNILEAFDDFIFAFFAVEM
VIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAIN
RVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDNNFVRNNN
LTFLNPYYQTEEGEENPFICSSHRDNGMQKCSHIPIRRELRVECTLGLEAYGRSLESLDG
GGRNSCINWNQYYNVCRTGDLNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAH
SFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFS
EPGSCYEELLKYIGHIFRKVKRRTLRLYATWQKKRREKVNPNGALHGQGVGRRGRKRVPS
IHHLIHHHHHHHHHHYHISNGSPRGPCGSPEVRGDVEPRGGKPGTRLMLPPPPSPGPQGL
PSPPHDAESVHSIYHADCHVEAPQDQGGRVSRAAAGLKLATGLGSMNYPTILPSASGGKG
SLALGPVGKKGSGPPVPVVNNSSVSLSADAYGKLQHLVGEHGLCRAPSRLSGLNVPCSLP
SPQAAMLTCELQNCPYCANILEDPEFELSELESYDSDTNGVYEFTQDLRHGDHRDPIQQP
QQAPPQSGSRRRGGVPRKKAGDRSGVACLWAAFGNKLKRIVESKYFNRGIMIAILINTLS
MGIEHHEQPEELTNALEISNIVFTSMFALEMLLKLLAFGLLGYIRNPYNIFDGIIVVISV
WEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIF
SILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSS
WAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFEEDFEKLRDLR
ATEMKMYSLAMTPNGHLEGRGSLPPPLIMRTAATPMLTPKSSPNVDSTPNLLDSRRGSSV
SVDPQHYDQKSMSSLRSSPCANWGPNSTWGSRRSSWNSLGRAPSLKKKSQCGERESLLSG
EGKGSTDDESDDAKPGSAGRASQLRRAESLDYRSTLDLREGLQRLSPRPTTLLPLEYQDC
NGQMVHMPNEFFLRIDNHKEDPSDYDDDMDDSYCFRLKKMLEPYKPEWCKTHEDWSFYLF
SPQNRARVTCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPNSTERVFLSVSNYIFTA
IFVAEMMVKMVALGFFSGENSYLQSSWNVLDGLLVFVSIIDIIVSMASAGGAKILGILRV
LRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFY
YCDGPDTRNITTKADCCAAHYRWIRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAV
GINQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKR
LRRLEKKRRSKAIYVSGILPNTEAQRRPYYADYSPTRRSIHSLCTSHYLDLFITFIIGIN
VITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAMLKLVAFGFRRFFKDRWNQLDLAIVL
LSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVG
NLGLLFMLLFFIYAALGVELFGKLDCSEDNPCEGLSRHATFTNFGMAFLTLFRVSTGDNW
NGIMKDTLRECAREDKHCLSYLPIISPVYFVTFVLVAQFVLVNVVVAVLMKHLEESNKEA
REDAEMDAEIELEMAQSSTTPAALARGPGPPPGPDSRPPRGSRRTGSPESTLSMKQQVLE
GAGSSRESQNLLMVHKVAVSRMHSLPNDSYMFRPVVPATAPNTLQEVEMETYPAKTPTGS
VTSVHSQPMESCSSLQVPVENASLSAAPGPSLSASTEVPRSSQSTPRSPSLSRLLCRQEA
LRTDSLEGQIADSRDTLTGEPSENTQPKRGLAGTLGASLMCLTPLSLPGTPPRSPTSSPH
SRPASVRTRKHTFGQRSIAKRPSGQSRDSPTDPETSDPADEEVSHINSSVRAWKPQVEAR
SHSASTFSSPARKPSASPSEGHVGGGGLDRDLKKFYSVDAQGFLDKPDWADDQRRHSVEV
CSSISEGESIYEESGEKKARASCPVETEPAPGVRRKKKMSPPCISIDPPAEYEGTLAPRP
SVSESSATTLRRRTPSCEVTLTPAASHRDSLEQGESGASGADMPPKGEWRVPAQCRAELL
MVPNFSFELPDAGSPGGGHFLDSGQPMAANSRPEAGESPAGATTPVELQKTEHFKSSGDP
PEKGQELLLTVPKSPLKKSGPPPTTPTTDDQIDEPV
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggaaacagcccttgcagccgctggctagcgacgaggtccgggtg
cccatcgcgtcggtccaggctgcccagcctggggaggaggaggaggaggatgcggccagc
ggcagcaagtctctccaaggcagcgtggcctcgggggcgtcctctgcccgggaacgggag
ctggagcgtgagtgcgcgccggaacccgagccggagccggagccgaagccggcgcccgag
cccgaacccgagcaagaaccggagccggagctgggcgccgctgatgaggaacaagtcccc
tacccagctctggccgccacagtcttcttctgcctcaagcagacttcgcggccgcggagc
tggtgcctcagactggtctgtaacccctggttcgagcatgttagcatgctggtcatcctt
ctgaactgcgtgactttgggcatgttccagccctgtgaggatgtggaatgccagtcagag
cgctgcaatatcctggaggcatttgatgacttcatctttgccttctttgctgtggaaatg
gtcatcaagatggttgccttggggatcttcggccagaaatgttacctgggagatacatgg
aaccgtctagacttcttcattgtcatggctggcatgatggaatattctctggacggacac
aacgtcagcctttctgccatccggactgttcgcgttctgcggccactcagagccattaac
agggtgccaagcatgcggatcctggtgacattgctgctggacacactgcccatgctgggc
aacgtcctgctcctctgtttctttgttttcttcatctttggcattgtgggggtgcagctc
tgggctggacttctaaggaacagatgcttcctggacaacaactttgtcaggaataacaac
ctgacctttctgaacccctattaccagacagaagaaggtgaggagaacccattcatttgt
tcttcacaccgtgacaatggcatgcagaagtgttcccacatccccatccgccgggagcta
cgggtagagtgtacactaggcctagaggcttatggccgctccttggagagtcttgatggt
ggtggaagaaactcctgcatcaactggaatcagtactacaacgtgtgcaggacaggtgac
ctcaacccgcacaacggagccatcaactttgacaatattggctatgcctggatcgctatc
ttccaggttataaccttggaaggctgggttgacatcatgtattatgtcatggatgcacat
tctttttataattttatatattttatattactaataatcgtgggctctttcttcatgata
aacctgtgcctggtggtgatcgccacgcaattctcagaaacaaagcagcgggagaaccag
ttgatgcaggaacaacgggctcgctacctctccaatgatagcaccattgccagcttctcc
gaaccaggcagctgctatgaggagctcctcaaatacattggtcacatcttccgaaaagtg
aagcgtcggaccctgaggctgtatgccacttggcagaagaagcgccgggagaaggtcaac
cccaacggtgccctccacggacagggggtcgggcgccgtggccgcaaacgggtcccctcc
atccaccacctgattcaccaccatcaccaccaccaccatcatcactaccacatcagcaac
gggagccctaggggcccctgcggtagccccgaggtccgcggggatgtggagcccagaggg
gggaagcctggcacccggctcatgctgccacctcccccgtccccaggcccacagggactc
ccatccccacctcatgatgctgagtcagttcacagcatctaccatgccgattgccacgtg
gaagccccacaagatcagggtggccgagtgtcccgggctgctgcagggctcaaactggcc
actggacttggtagcatgaactaccccaccatcctgccttcagcttcagggggcaagggt
agtttggctctgggtcctgtggggaagaagggcagtgggccgcctgtcccggtagtgaac
aacagctctgtgagtttgagtgctgacgcctatgggaagctgcaacacttggttggggaa
catggtctctgcagggctcccagcaggctgtcaggcctaaatgtgccctgctccctaccc
agtccccaagcagccatgctgacatgcgaactgcagaattgtccctactgtgccaacatc
ttggaggatcctgagtttgaactgagtgagctggagagctatgactccgacaccaatggt
gtttatgaattcacacaagacctgcggcatggagaccaccgagaccccatccagcagcct
cagcaggccccaccacagagcgggtccaggcggcggggaggggtccccaggaagaaggcg
ggggaccgcagtggggtggcctgtctctgggcggcttttggaaacaaactcaagcggatt
gtggaaagcaagtacttcaaccgaggtatcatgatcgccatcctgatcaacaccctcagc
atgggcatagaacaccatgagcagcctgaagagctgaccaatgccttggaaatcagcaac
atcgtcttcaccagcatgtttgccctggagatgctgctgaagctgttggcctttgggctt
ctgggctacatcaggaatccttacaatatctttgatggtatcatcgttgttatcagtgtc
tgggaaattatcgggcagtcagatgggggcctgtcagtactccggacctttaggctcctt
cgggtgctgaagctggttcggtttatgccagctcttcgacgacagctagtggtgctgatg
aaaaccatggacaatgtggccaccttctgtatgctgctgatgctgttcatctttatcttt
agcatccttggcatgcacctcttcgggtgtaaattcagcttgaaaactgacactggagac
accgtcccggacaggaagaattttgactccttgctctgggccattgtcactgtgttccag
attctcacccaagaagactggaatgttgtgctttataatggcatggcctccacttcctct
tgggctgctctctactttgtggcgctgatgacctttggcaactatgtgctgttcaactta
ctggtggccatcctagtggagggcttccaggcagagggggatgcaaatagatctgacacc
gatgaggacaagacatcagctaacttcgaagaggattttgaaaaactgagagacttacgt
gccacagagatgaagatgtattcactggcaatgacacccaatgggcatctggagggccgt
ggcagtctgcctccacctctcatcatgcgtactgcagctacacccatgctgacgcccaag
agttctcccaatgtggactccacccccaacctcctggactcacgcagaggcagcagtgtc
tctgtagacccccagcactatgatcagaagtcaatgtccagcctacgcagttctccctgt
gccaactggggccccaatagtacatggggcagcaggcgctccagctggaacagcctgggc
cgggcgcccagcttaaagaagaagagccaatgtggggagcgagagtccttactctccggg
gagggcaaaggcagcacagacgacgagtcagatgatgctaagccaggctcagcaggccga
gcatcccaactgcgccgagccgagtccctggactaccgaagtacgctggacctgcgagag
gggctccagcggctgtccccacgcccaactactctgctgccccttgaataccaggactgc
aatggccagatggtgcacatgcccaatgagttcttcctacgcatcgacaaccacaaggag
gatccttcagattatgatgatgacatggatgatagctactgcttccgattgaaaaagatg
ttagagccatacaagccagaatggtgtaagacccatgaagactggtctttctacctgttc
tcacctcagaaccgggctcgggtcacatgtcagaaggtcattgcccacaaaatgtttgat
catgtggtcctggtgttcatctttctcaattgcatcacaatagccctggagagacctgac
attgatcctaatagcacagagcgggtcttcctgagtgtttccaattacatcttcacagcg
atctttgtggctgaaatgatggtgaagatggtggctctgggttttttctctggggaaaac
agttacctgcaaagcagctggaatgtgctggatggactactagtctttgtctccatcatc
gacatcattgtctccatggcttcagctggtggggccaagatcctaggcatcctccgggtc
ctgcgattgctgaggacactgagaccacttcgggtgatcagccgagccccaggccttaag
ttggtggtggagacgttgatatcatccctcagacccattggaaatattgtcctcatctgt
tgtgccttctttataatctttggtattcttggggttcagctctttaagggtaagttttat
tactgcgatggtccagacactcgaaacatcaccaccaaagctgactgctgtgcagcccat
taccgctggatccggcgcaaatataacttcgataacctgggtcaggctcttatgtccctt
tttgtgctctcgtccaaggatggctgggtgaacatcatgtatgatggcctggatgctgtg
ggcatcaaccaacagcccatccagaaccacaatccctggatgttgctgtacttcatctcc
ttcctgctcatcgtcagcttctttgtcctgaacatgtttgtgggcgtggtggtggagaac
ttccacaagtgccggcagcaccaggaggcagaggaggcgcggcggcgggaagagaagagg
ctccgcaggctggagaagaagcgtaggagtaaggcgatatacgtgtccggcattctccct
aacacagaagcccagcgcaggccgtactatgctgactattcacccacccggagatcaatc
cacagcctgtgcactagccattacttggacctgttcattaccttcatcatcgggatcaat
gtgatcaccatgtctatggaacattataaccagcccaagtccctggatgaagccctgaag
tactgcaattatgtcttcaccatcgtcttcgtctttgaggctatgttgaaactagtggcc
tttgggttccgtcgattcttcaaggacaggtggaatcaactcgacttggccatagtgctt
ctgtccatcatgggcatcactctggaggaaatcgagatgaatgcagccttacccattaac
cctaccatcatccgaatcatgcgtgtgctccgcattgctcgagtactgaagcttctgaaa
atggccactgggatgcgggccctactggacactgtggttcaggcattaccccaggtaggg
aaccttggcctgcttttcatgctcctgttttttatctatgctgccctgggagtggagttg
tttggaaagctggattgcagtgaagataacccatgtgagggcctgagcagacacgccacc
ttcaccaacttcggcatggccttcctcaccctcttcagggtgtccacgggggacaactgg
aacggaatcatgaaggacacgctacgggagtgtgcccgagaggacaagcactgtctgagc
tacctgcccatcatctctcccgtctacttcgtcaccttcgtcctggttgcccagtttgtg
ctggtcaacgtggtggtggctgtgctgatgaaacacctggaggaaagtaacaaggaggcc
cgggaagacgctgagatggatgctgagattgagctggagatggcacagagcagtacgact
cctgctgccctggcccgaggcccagggccgccccctggcccggacagccggccacccaga
gggagtcgccggactgggagtcctgagtccactctgtctatgaagcaacaagtcctggaa
ggagctgggtcttccagggaatcccaaaacctccttatggtgcacaaggttgctgtgtcc
aggatgcactccctacccaatgacagttatatgttccggcctgtggtgccagccacagcc
ccaaacaccctgcaagaagtggagatggagacatacccagcaaaaaccccaacaggttca
gttacttctgttcactctcagcctatggaatcctgttcatccctgcaagtcccagtggaa
aatgcatctctgtcagctgcacctgggccttccctttctgccagtactgaggttccaagg
tcctcacaaagtactccaaggtcacccagcctgagtagactgctctgtagacaggaagcc
ttgcggactgattcccttgaaggccagattgcagattccagggacacccttacaggggag
cccagtgagaacactcagccaaagcggggcctggcaggcaccctgggtgcctccctgatg
tgcctcacccccctctccctgcctgggacccctcctcgctctccgacctcctccccccac
tcccgccccgccagtgtccgtacccgtaagcacacctttggccagcgaagtattgccaag
cgacccagcggacagagcagagactctcccacagaccctgagacctcagacccagctgat
gaggaggtgagtcacattaacagctcggtgcgggcttggaagccccaggttgaggcgcgg
agccactcggcttcaacgttctcctccccggcccgcaagccctcggcttcccccagtgag
ggccatgtgggaggcggcgggctggacagagacctgaagaagttctacagcgtggacgct
cagggcttcttggacaaacctgactgggccgacgaccagcggcgacactccgtggaggtc
tgctcctccatcagtgagggggagagcatctatgaggagtctggggagaaaaaggccagg
gcatcttgtccagtggagactgagcctgctccaggggtacgaaggaagaagaagatgagc
cccccttgtatttccattgatcctcccgcagagtatgagggcaccctggctccccgcccc
tcggtgtccgagagcagtgcgactactctgaggaggaggacgccatcctgtgaggtgacc
ctgactcccgcagcctcccacagggactccctggagcagggagagagtggggcaagtggg
gccgacatgccccccaaaggggagtggcgggtcccggcccagtgccgggcggagcttcta
atggttcccaacttctcctttgagttgccagatgcaggctctccaggtggtggtcacttt
ttggacagtggccagcccatggccgccaactcccgaccagaggcgggagagtcccccgcg
ggggcaacaactcctgtggaactccaaaaaacagagcatttcaaatcttccggagaccct
cctgagaaaggccaggaactcctcctcactgttcccaaaagccccctgaagaagtcagga
ccaccccccacaacacccactacagatgaccaaatagatgaaccagtatag
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integrated database retrieval system
