Sarcophilus harrisii (Tasmanian devil): 100934762
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Entry
100934762 CDS
T02286
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100934762 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100934762 (GSPT1)
03012 Translation factors [BR:
shr03012
]
100934762 (GSPT1)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100934762 (GSPT1)
Translation factors [BR:
shr03012
]
Eukaryotic type
Release factors
100934762 (GSPT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100934762
NCBI-ProteinID:
XP_012398402
Ensembl:
ENSSHAG00000005908
UniProt:
G3VUE2
LinkDB
All DBs
Position
1:complement(299507779..299557600)
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AA seq
636 aa
AA seq
DB search
MDPGSGGGGSSSGSSSSDSAPDCWDQADMEAPGPGGAPPAATAAAAEAQNLSAAFSRQLN
VNAKPFVPNVHAAEFVPSFLRGPVQQPPPPPPPPAGATAAQGDGTGAGGPAGPKAPVEPS
QEEQSVLYEGSNSAVSMEVSEPVVENGETEMSPEESWEHKEEPSEAESGGGSLGDGGPPE
ESVPEMMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDK
RTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHK
SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD
DPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLP
FIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEV
LGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHK
SIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTI
CLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagcggcggcggcgggagcagcagcggcagcagcagcagcgactcggcg
cccgactgctgggaccaggcggacatggaagccccaggccccgggggcgcccctccggcc
gccacggccgccgcggccgaggcccagaacctcagcgcggccttcagccggcagctcaac
gtcaacgccaagcccttcgtgcccaacgtccacgccgctgagttcgtgccgtccttcttg
cggggcccggtccagcagccgccgccaccgccgccgcccccagccggcgccactgccgcc
cagggagacggcaccggagcaggaggccccgccggccccaaggcacctgtggaaccttct
caagaagaacagtcagtgttgtatgaaggttcaaattcagctgttagcatggaagtttca
gaacctgttgtagaaaatggagagacagaaatgtccccagaagaatcatgggagcacaaa
gaagaacctagtgaagcagagtcagggggtggctctttgggagacggagggcctccagag
gagagtgtcccagaaatgatgatggaggaagaggaagaaatacccaaacctaaatctgtg
gtagcaccaccaggtgcacccaaaaaagagcatgtaaatgtagtattcattgggcatgta
gatgccggtaaatcaactattggaggacaaataatgtatttgactgggatggttgacaaa
agaacacttgaaaaatatgaacgagaagctaaagaaaaaaacagagaaacttggtacttg
tcatgggccttagatacaaatcaggaagaacgagacaaaggtaaaactgtggaagtgggc
cgtgcctactttgagacagaaaagaagcacttcaccatcctagacgctcctgggcacaag
agttttgtcccaaatatgattggtggtgcttcccaagctgatctggctgtgctggtaatc
tctgctcggaaaggagaatttgaaactggatttgaaaaaggaggacagacaagagaacat
gccatgttggcaaaaacagcaggtgtaaaacacttaatagtgcttattaacaagatggat
gatccaacagtaaattggagcaatgaaagatatgaagaatgtaaagaaaagttggtgcca
tttttgaaaaaagttggcttcaatcccaaaaaggatatacacttcatgccctgctcagga
ttgactggtgcaaaccttaaagagcaatcagatttctgtccttggtatatcgggttacca
tttattccatatctggataatttgccaaacttcaacagatcagttgatggaccaattagg
ctgccaattgtggataaatacaaggacatgggtactgtggtcctgggaaagttggaatcc
ggctctatttgtaaaggacagcagcttgtgatgatgccaaacaagcacaatgtggaagtt
cttggaatcctttctgatgatgtagaaactgattctgtagccccaggggaaaacctcaag
attagactgaagggaattgaagaagaagaaattcttccaggattcatactttgtgatcct
aataatctttgtcattctggacgcacgtttgatgcccagatagtgattattgagcacaaa
tctatcatctgcccaggttataatgcggtgctgcacattcatacctgtatcgaagaagtt
gagataacagccttaatctgcttggtagacaaaaaatcaggagaaaaaagtaagacacga
ccacgttttgtcaaacaagatcaagtatgcattgcccgtttaaggacagcaggaaccatc
tgccttgagaccttcaaagatttccctcagatgggtcgttttaccttaagagatgagggg
aagaccattgcaattggaaaagttctgaaactggttccagagaaggactaa
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