Sarcophilus harrisii (Tasmanian devil): 100934909
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Entry
100934909 CDS
T02286
Symbol
SNX1
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100934909 (SNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100934909 (SNX1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
shr04990
]
100934909 (SNX1)
Membrane trafficking [BR:
shr04131
]
Endocytosis
Macropinocytosis
Sorting nexins
100934909 (SNX1)
Domain-containing proteins not elsewhere classified [BR:
shr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100934909 (SNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
HR1
DUF2043
Motif
Other DBs
NCBI-GeneID:
100934909
NCBI-ProteinID:
XP_031811270
Ensembl:
ENSSHAG00000018508
UniProt:
G3X2F9
LinkDB
All DBs
Position
2:complement(521854633..521913120)
Genome browser
AA seq
526 aa
AA seq
DB search
MASGGGGGGCSASERLPPPFPIPEPPGPEGAAGGGGSELEAGDSDAEGEDIFLGAASKSL
SVKRVSPPPITSNSKENGVHEELDQDQQDLFADATVELSLDSTHNHQKDELAKALPSSSL
QEVTNSSCKSQPKNYEELEEEEQEDQFDLTICITDPEKIGDGMNAYVAYKVTTQTSLPMF
RSKQFSVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLE
KRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQALSGAGLLKMFNKATDAVS
KMTIKMNESDIWFEEKLQEVECEEQRLRKLHTVVETLVNHRKELALNTAQFAKSLAMLGS
SEDNTALSRALSQLAEVEEKIEQLHQEQASNDFFLLAELLSDYIRLLAIVRGAFDHRMKT
WQRWQDAQTMLQKKRETEARLLWANKPDKLQQAKDEIAEWESRVTQYERDFERISTVVRK
EVIRFEKEKSKDFRNHVIKYLEALLFSQQQLVKYWEAFLPEAKAIS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcggcggcggcggcggctgtagtgcctcggagcgtctccccccacccttc
ccgatcccggagcccccggggcccgagggggcggccggcgggggcggctcggagctcgag
gccggggacagcgacgccgagggcgaggacatcttcctgggcgccgccagtaaatccctg
tcagtgaagcgagtatcccctccaccaatcactagcaactccaaagagaatggagtccat
gaagaactagatcaggatcagcaagacctttttgcagatgccacggtagagctgtctctg
gatagcacacacaaccaccagaaggatgagttggccaaagcacttccttcatcctctctc
caagaagtcacaaattcttcatgcaagtcacagccaaagaactatgaggagctggaggaa
gaagaacaggaggaccagtttgatctgacaatttgcataacagatccagaaaagatagga
gatgggatgaatgcatatgtggcctacaaagttacaacacagaccagcttgccaatgttt
agaagtaagcaattttcagtgaaaagaagatttagtgattttttgggactctatgaaaaa
ctttcagagaaacactcacagaatggatttattgtccctcctcctccagagaagagctta
ataggaatgactaaagtaaaagttgggaaagaagattcttcttctgcagaatttctagaa
aaaagaagggctgctctagaaaggtatcttcagagaattgtgaaccatcctaccatgtta
caggatcctgatgtcagagagttcttagaaaaggaagagttgccacgagcagtgggtaca
caggcattgagtggagctggtcttctcaagatgttcaacaaagctactgatgcagtgagc
aaaatgaccatcaagatgaatgagtccgacatttggtttgaggagaaactccaggaggtg
gagtgtgaggagcaacgcttacggaaactacatactgttgtagaaactctagtcaaccat
aggaaagagttagcactaaacacagcccagtttgcaaagagtctggctatgcttgggagc
tcggaggacaacacggccctgtcccgggctctgtcccagctggcggaggtggaggagaag
atcgagcagctgcaccaggagcaggccagcaacgactttttcctcttggccgagctcctg
agtgactacatccgcctgctggccatagtcagaggcgccttcgaccaccgaatgaagacc
tggcagcgctggcaggatgcccagaccatgctgcagaagaaacgggaaaccgaggcccgg
ctgctgtgggccaacaaacctgacaagctgcagcaagccaaagacgagattgcagaatgg
gagtctcgtgtgactcagtatgaaagagactttgaacgaatttcaactgtggtgcgcaaa
gaagtgataaggtttgagaaagaaaaatccaaggacttcagaaaccatgtgatcaagtac
cttgaagcccttctcttttcccagcagcagctggtgaaatactgggaagcctttctccct
gaggcgaaggccatctcctaa
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