Sarcophilus harrisii (Tasmanian devil): 100934981
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Entry
100934981 CDS
T02286
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100934981 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100934981 (VPS8)
Membrane trafficking [BR:
shr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100934981 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
zf-RING_Vps41
TPR_Vps41
TPR_VPS8_2
Clathrin
WD40_CDC20-Fz
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_2
zf-RING_UBOX
EIF3I
zf-C3H2C3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100934981
NCBI-ProteinID:
XP_031823940
Ensembl:
ENSSHAG00000010427
UniProt:
G3W9R4
LinkDB
All DBs
Position
4:complement(453528538..453653582)
Genome browser
AA seq
1427 aa
AA seq
DB search
MASEVDPESEEAAPSPRGGLGEGLAQALEASLPRLTCIDLDKDLEFRNELIDDKEFDIPQ
VDTPPTLESILNETDDEDESFVLEDPTLLNIDTFDTHSYDTSSVASSDSGDRTNLKRKKK
LLDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGKD
QNQALRLCLGSTSVGGQYGAISALSINHDCSRLLCGFAKGQMTMWDLASGKLLRSITDAH
PPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPL
HSKAELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAA
NNYVNPTLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDSV
EKLHVIDRLTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYG
GQIFYLGTKSVYVMTLRSWRERVDHLLKQECLPEALALAWSFHEGKAKAVVGLSGDASKR
KAVVADRMVEILFHCTDRALKKCPDQGKIQVMEQHFQDTVPVVVDYCLRLQRRDLLFSQM
YDKFSENSVAKGVFLECLEPYILSDQLVGITAQVMKDLLIHFQDKKLMENVEALIVHMDI
TSLDIQQVVLMCWENHLYDAMIYVYNSGMNEFISPMEKLFKVIAPPLSAGKSLTDEQVIM
GNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASSEEEIYPYICTLL
HFDTREFLNVLALTFEDFKNDKQALEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQ
LAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAE
RAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYVHNILSIPGHSPEEKQSVGQKA
MQHIEELVSLNPCKAAELVATHFSGQVEAVIQKLQNPFLLFQFLRSLLDPREGVSVNQES
LHASPCITEQFIELLCQYNPHQVIDTLQVLESYRLEETIQITQKYQLLEVCAYLLEKKGD
VHGAFLIMLERLQSKLQQFTKESENSRESSSLKAVEEILVETIALCQRNSQSLNQPQREA
LWFPLLEAMMAPQKLSSSCAPPRLAEPLKSLTMQVLNSMAAFIALPSILQRILQDPVYGR
GKLGEIQGLILGMLDTFNYEQTLLETTTSLLNHDLHWSLCNLRASVTRGLNPKQDYCCIC
LQQYRRRQEVADDIVVFSCGHLYHSLCLLNKECAVGTGNQARWTCYRCNSSNKAGKLSEK
ASEVKKGQLAQAQVKMSPSCPSPRGDAAAKKAPSELGLDPQQIQAFDQLCRLYRGTSRLA
LLTELSQNQSGESRRLLGGSKSSPALNSIFQNENFQLHLSPPPLSED
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaagtcgatcccgagagtgaggaggcagccccctcgccccgcggaggcctc
ggggaaggcctggcccaggccctggaggcttccctgcccaggctcacctgcatagacctg
gacaaggacctggagttcagaaatgagctgatcgatgacaaggagtttgatattcctcag
gtggacaccccgcccaccctcgaaagcattctcaatgagaccgatgatgaagacgaatcc
tttgttcttgaggatccaacgctgttaaatatcgacacctttgacacgcactcctacgac
acgtcgtcggtggcaagctccgacagcggtgatcgaaccaatctgaagaggaagaagaag
cttcttgattctttttctctccatggctcagtcatgcggcattcgcttctgaaggggatc
tctgcccagatcgtctcggcagctgacaaagttgatgccggcttgcctactgcaatagct
gtatccagtctgatcgcagtggggacttctcatggattggccttaatcttcggaaaagat
cagaatcaagccctgcgcctctgcttgggcagcaccagcgtcgggggacagtacggggcc
atctctgccctcagcatcaaccacgactgctccagacttctctgcggctttgccaaaggc
cagatgaccatgtgggacttggccagcgggaagcttttgagatcaataacagatgctcac
cccccaggaacagcaattctgcacattaagttcacagatgacccaactctggccatttgc
aacgacagcggcggttctgtgtttgagctgacatttaagcgggtgatgggagtgaggacg
tgtgaatcccggtgtctgttcagcgggtccaagggggaagtttgctgcatcgagcctctg
cactccaaggccgagctgaaggatcaccccataacccagttctccttgctggccatggcg
tccctaactaaaatattggtcattggactgaagccatctctgaaagtgtggatgactttc
ccctatggacggatggatccttccagcgtcccgctgctggcctggcattttgtggccgcc
aataactacgtgaaccccacgctggccttttgccgaggggacgtcgttcacttcctgttg
gtgaagcgggatgagtcgggcgccatacacgtcaccaagcaaaagcacctgcacctctac
tatgacctcattaacttcacttggatcaattcccggacgatcgtgctcctggacagtgtg
gagaagctgcatgtgatcgaccggctgacgcaggaggagctggagacggtagaaatctcc
gaggtgcagctggtctacaacagtagccacttcaagtctctggccacgggtggcaacgtc
agccaggccctggctctggttggagagaaagcctgttaccagtccatcagcagttatggt
ggccagatcttttatttggggacaaaatctgtttatgtgatgacgttgaggagctggaga
gagagagtggaccatctcctgaaacaagagtgtctgccggaggccttggctctcgcgtgg
tccttccacgaagggaaggccaaagctgtcgttggcttgtctggggacgccagcaagcgg
aaggccgtcgttgccgatcggatggttgaaatcctcttccactgtacggaccgagctttg
aaaaaatgcccggaccagggcaagatccaggtgatggagcagcattttcaggacacggtg
cccgtggttgttgattactgccttcggctgcagcgcagggatctcctgtttagccaaatg
tacgacaagttcagtgagaattcggtggccaaaggagtcttcctggagtgcctggagccg
tacattctgagtgaccagctggtggggatcaccgcccaggtgatgaaggatctgctcatt
cacttccaagataaaaagctgatggagaatgtggaggcactgatcgtgcacatggacatc
accagcctggacatccagcaggtggttctcatgtgctgggagaaccatctctacgacgcc
atgatctacgtctacaacagcggcatgaacgagttcatcagccccatggagaaacttttc
aaggtcattgctcctcctctgagcgcagggaagtccctgacagatgagcaggttatcatg
ggcaacaagcttcttgtgtacatcagctgctgcttggcgggccgggcttaccccctgggg
gatatccctgaagacctggtgcccttggttaaaaaccaggtcttcgagtttctgatccgc
ctgcattctgcggaagcctcctcggaggaggagatctacccctacatctgcaccctgctt
cacttcgacaccagggagttcctgaacgtcctggctctgacttttgaagattttaaaaat
gacaagcaggctctggaataccagcagcggatcgtggacatcttgctgaaggtcatggtg
gaaaattccgactttactccttcccaagtcgggtgcctcttcaccttcctggcccggcag
ctcgccaagcccgacaacacgctcttcgtgaacaggacgctttttgaccaggtgctcgag
ttcctctgcagccccgatgatgactcccgacactcggagaggcagcaggtcctcctcgag
ttgctccaggccggagggattgtgcagtttgaggagagccggctcatccggatggccgag
agagccgagttctaccaaatttgtgagtttatgtatgaacgagagcaccagtacgacaag
atcatcgactgctacctccgggaccccctgagagaggaagaggtgttcaactacgtccac
aacatcctgtccattcccgggcacagccccgaggagaagcagtccgtggggcaaaaggcc
atgcagcacattgaggagctcgtgtctctgaacccctgcaaagcagcagagctggtggcc
acccatttctccgggcaagttgaggcggtcatccagaaacttcagaacccgtttctgctc
ttccagtttctgaggagccttcttgacccaagggaaggagtttccgttaaccaagagtct
ctgcacgcgtccccttgcatcacggagcagttcattgagctgctgtgtcagtataaccct
caccaagtgattgacactctgcaagtcctagagtcctaccggctggaagagaccatccag
attacccagaagtaccagcttcttgaagtatgtgcctacctcttagagaagaaaggagat
gttcatggtgctttcttaataatgctcgagagactacaaagcaagctccagcagtttaca
aaggaaagtgaaaactcgagagagagctcttccctcaaggccgtggaagagatcttggtg
gagaccatcgccctctgccagaggaattcacagagtctgaaccagccccagcgagaggcg
ctctggtttcccctcttggaggcaatgatggcccctcagaagctgtccagctcctgcgct
ccccctcgcctggcagaacccttgaagtctctaaccatgcaggtgctgaacagcatggca
gccttcatcgctctgccgtccatcttgcagcgaatcctgcaggatccagtttatggaaga
ggaaaacttggcgagatccaaggactgatcctgggaatgctggacacctttaactacgaa
caaactctcctggagaccaccaccagcctcctcaaccacgacctgcactggtccctctgt
aacctgcgggcatcggtcaccagggggctgaacccaaagcaggattactgctgcatctgc
ctgcagcagtaccggcggcgccaggaggtggccgacgacatcgtcgtcttcagctgcggc
catctctaccactccttgtgcctgctgaacaaagagtgtgccgtgggcacggggaaccag
gcccgctggacgtgctacagatgcaattcaagcaacaaggcagggaagctcagcgaaaag
gcatctgaagtgaagaaggggcagcttgcccaggcccaggtgaaaatgtctccttcctgt
ccatcgccccgaggagatgctgctgcgaagaaggccccgtcagaactgggtctggacccc
cagcagatccaggctttcgaccagctctgccgcctttaccggggaacctccaggctggcg
ctgctgaccgagctgtcccagaaccagagcggggagagtcgccggctgctggggggctcc
aagagcagccccgccctcaacagcatcttccagaacgagaacttccagctgcacctgagc
cctccccccctgagcgaggactga
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