Sarcophilus harrisii (Tasmanian devil): 100935137
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Entry
100935137 CDS
T02286
Symbol
POU2F1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05168
Herpes simplex virus 1 infection
shr05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100935137 (POU2F1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100935137 (POU2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100935137 (POU2F1)
03021 Transcription machinery [BR:
shr03021
]
100935137 (POU2F1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100935137 (POU2F1)
Transcription machinery [BR:
shr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
100935137 (POU2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100935137
NCBI-ProteinID:
XP_031792688
LinkDB
All DBs
Position
4:54976982..55198244
Genome browser
AA seq
762 aa
AA seq
DB search
MADGGAASQDESSAAAAAAADSRMNNPSETSKSSMESGDANTGTQTNGLDFQKQPVPVGG
AISSAQAQAFFGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAPI
PQTQLMLAGGQITGLALTPAQQQLLLQQAQAQLLAAAVQHSASQQHSAAGATISASAATP
MTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQ
AQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLE
EPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMC
KLKPLLEKWLNDAENLSSDSALSNPSALNSPGQGIEGLNRRRKKRTSIETNIRVALEKSF
LENQKPTSEEITMIADQLKMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPT
SLVATTPSLVTSSAATTLTVNPVLPLTSAAVTNLSVTGTTETTSNNTATVISTAPPASSA
VTPPSLSPSPSASASEASSASETSTTQTTSAPLSSPLGTSQVMVTASGLQTAAAALQGAA
QLPANASLAAMAAAAGLSPGLMAPSQFAAGGALLSLNPGTLGSALSPALMSNSTLATIQA
LASGGSLPITSLDATGNLVFANAGGTPNIVTAPLFLNPQNLSLLTSNPVSLVSAAAASAG
TSAPVASLHATSTSAESIQNSLFTVASAGGPASTTTTASKAQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagccgcggcggcagcagcagca
gactcaagaatgaacaatccgtcagaaacaagtaaatcatcaatggaaagtggggatgcc
aatacaggtacacagacaaatggcctagactttcagaagcagcctgttcctgttggagga
gcaatctcttcagctcaggctcaggccttctttggacacctacatcaggtccaactcgct
ggaacaagtttacaggctgctgctcagtccttaaatgtacagtctaaatctaatgaagaa
tctggggattcccagcagccaagccagccttcccagcagccttcagtgcaggcacccatc
ccccaaactcagctcatgctggctggaggacagataacagggcttgccctgaccccagcc
cagcagcagttactgctacagcaggcacaggcccagctgctggcagctgcagttcagcat
tcggccagtcagcagcacagtgccgcgggtgccaccatctcggcctccgctgcaacgcca
atgacgcagatccctctgtcgcagcccatacagattgcacaggatttgcaacagctgcaa
cagctacaacagcagaatctcaacctgcaacaatttgtgttggtgcatccaactaccaac
ttgcaaccagcacagtttatcatctcgcagacgccacaggggcagcagggcctcttacaa
gcgcagaatcttttaacacaactacctcagcaaagccaagccaacctcctgcagtctcag
ccaagcatcaccctcacctcacagccagcaaccccaacacgcacaatagcagcaacccca
attcagacactcccgcagagccagtcaacaccaaagcgaattgatacacccagcttggag
gagcccagtgaccttgaggagcttgagcagtttgccaagactttcaaacaaagacggatc
aaacttggattcactcagggtgatgttgggctcgctatgggcaaactctatggaaatgac
ttcagccaaactaccatctctcgctttgaagccttgaacctcagctttaagaacatgtgc
aaattaaagccacttctagagaagtggctaaatgacgcagagaacctctcatctgattca
gcactctctaacccaagtgccctgaattctccagggcaggggattgagggtttgaaccgc
aggaggaagaaacgcaccagcatagagaccaacattcgtgtggccttagagaagagtttc
ctggagaatcaaaagcctacctcggaagaaatcaccatgattgctgatcaactaaaaatg
gaaaaggaggtgatccgtgtttggttttgtaatcgccgccagaaggagaaaaggattaat
ccacctagtagtggtgggaccagcagctcacctataaaagcaatttttcccagtccaacc
tcattggtggcaaccacgccgagccttgtgacaagcagtgcggccactaccctgaccgtc
aatccggtcctccctctaaccagcgcggcggtaaccaacctctctgtgacaggcactaca
gaaaccacctccaacaacaccgcaacagtgatttcgacagcacctccagcttcctcagca
gtgacacccccctctctgagcccctccccttctgcctccgcctctgaggcatccagtgcc
agtgagaccagcacaacacagaccacctccgcccctttgtcctcccctcttgggaccagc
caagtgatggtgacagcatccgggctgcagaccgcagctgctgccctccaaggagctgct
cagctgcctgcaaatgccagtcttgctgcaatggctgctgcagcaggtttaagtccaggg
ctgatggcaccctcacagtttgcagctggaggtgccttactcagtctcaacccagggaca
ttgggcagtgctctcagcccggctctgatgagcaacagtacactcgcaaccattcaagct
cttgcatctggtggatctcttccaataacatcactggacgcaactgggaacctggtattt
gccaatgcaggaggaactccaaacatcgtgaccgccccgctgttcctgaatcctcagaac
ctctctctgctcaccagcaacccagtcagcctggtctcggcggccgcagcctccgcagga
acctccgcaccagttgccagccttcacgccacatccacctcagctgagtccatccaaaac
tctctcttcactgtggcctctgctggtgggcctgcttccaccaccactaccgcctcgaag
gcgcagtga
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