Sarcophilus harrisii (Tasmanian devil): 100935281
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Entry
100935281 CDS
T02286
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
KO
K14299
nucleoporin SEH1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03013
Nucleocytoplasmic transport
shr04150
mTOR signaling pathway
shr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100935281 (SEH1L)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100935281 (SEH1L)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100935281 (SEH1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shr03019
]
100935281 (SEH1L)
04131 Membrane trafficking [BR:
shr04131
]
100935281 (SEH1L)
Messenger RNA biogenesis [BR:
shr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100935281 (SEH1L)
Membrane trafficking [BR:
shr04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
100935281 (SEH1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR55
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Mito_fiss_reg
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
100935281
NCBI-ProteinID:
XP_031802534
UniProt:
G3WEA8
LinkDB
All DBs
Position
1:508448730..508464366
Genome browser
AA seq
429 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDNSPNVSAKVQIYEYNENTRKYAKAESLMTVTDPVHDISFAPNLGRSFHILAV
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSSQQGISNASLGSNNPNLQNSLNGSSASRYF
FPPLDSPRAGSRWSSYAQILPPPPPPPPPPPPPLIEHSCDADTANFQYPHPRRRYISRPL
NPLPENEGV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggcgcgcagtatcgcggcggatcacaaggatctcatccatgatgtgtccttt
gacttccacgggcggcgaatggcaacttgctccagtgaccagagtgtgaaggtttgggac
aaaagtgaaagtggggattggcattgtactgctagctggaagacacatagtggttctgtg
tggcgtgtgacatgggcacatcctgaatttggacaggttttggcttcctgttcttttgac
agaactgctgctgtttgggaagaaatagtgggagagtccaatgataaacttcgaggtcag
agtcattgggttaagaggaccactttggtggatagcagaacatcagttactgatgtgaag
tttgctcctaagcatatgggtctcatgttagcaacctgttcagcagatggcgtagtgaga
atatatgaggctccagatgttatgaatcttagtcagtggtcactgcagcatgaaatttca
tgtaagctaagctgtagttgtatttcatggaatccctcgagttctcgtgctcattcccct
atgatagctgtaggaagtgatgacaatagtccaaatgtgtctgctaaggttcagatttat
gaatataatgaaaacaccaggaaatatgcaaaagcagaatcccttatgacagtcactgac
cctgtacatgatatttcatttgctccaaacttgggaagatcattccatatcctagcagta
gcaaccaaagatgtgagaattttcacgttaaaacctgtaaggaaagaattaacttcttct
ggtgggccaacaaaatttgagattcacatagttgctcagtttgataatcacaactctcag
gtttggcgagtgagttggaatataacggggacagtgctagcatcatctggagatgatggc
tgtgtaagactatggaaagctaattatatggacaattggaagtgcactggtattttgaaa
ggtaatgggagcccagtcaatgggagctcttctcagcagggaatctcaaatgcttcttta
gggtcaaacaatccaaatctacaaaattcattaaatggatcatcagctagcaggtatttc
tttccccctctggattccccacgggctggatcgagatggtccagttatgcccagatcctt
cctcctcctcctcctcctcctcctcctcctcctcctcctctgatagagcactcttgcgat
gctgacactgccaacttccagtatcctcaccctcgcagacgatatatctctcggcctctt
aatcccttacctgagaatgaaggggtttaa
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