KEGG   Sarcophilus harrisii (Tasmanian devil): 100935294
Entry
100935294         CDS       T02286                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
shr  Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03020  RNA polymerase
shr03420  Nucleotide excision repair
shr05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:shr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100935294 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100935294 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100935294 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shr03021]
    100935294 (POLR2D)
   03400 DNA repair and recombination proteins [BR:shr03400]
    100935294 (POLR2D)
Transcription machinery [BR:shr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100935294 (POLR2D)
DNA repair and recombination proteins [BR:shr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100935294 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom BIG2_C
Other DBs
NCBI-GeneID: 100935294
NCBI-ProteinID: XP_003763803
Ensembl: ENSSHAG00000014817
UniProt: A0A7N4UZW3
LinkDB
Position
3:319473197..319482783
AA seq 142 aa
MATGGSDPRAGDVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcgaccggaggcagcgaccctcgcgctggcgatgtggaagaagacgcctcgcagctc
gtcttccccaaagaatttgaaacagcagaaactcttctaaattccgaagtccacatgctt
ctagagcatcgaaaacaacagaatgaaagtgcagaggatgaacaagaactttctgaggtt
ttcatgaaaactttaaattacacagcacgctttagtcgttttaaaaacagggaaactatt
gctagtgttcggagtttgttactccagaaaaagctccataagtttgagttggcgtgctta
gcaaatctttgtcctgagacagcagaagaggctaaggctctgattccaagcctggagggt
cgcttcgaagatgaagaattgcaacagattcttgatgatattcagaccaaaaggagcttc
cagtattag

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