Sarcophilus harrisii (Tasmanian devil): 100935358
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Entry
100935358 CDS
T02286
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100935358 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
100935358 (TRIP13)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
100935358 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_18
AAA_14
Viral_helicase1
AAA_25
AAA_28
AAA_5
KAP_NTPase
ATPase_2
NPHP3_N
AAA_24
AAA_33
RuvB_N
NACHT
DUF815
ABC_tran
RNA_helicase
TsaE
TIP49
bpMoxR
AAA_17
Cytidylate_kin
AAA_11
AAA_7
AAA_30
ATPase
IstB_IS21
PduV-EutP
Mg_chelatase
AAA_19
Rad17
PhoH
OspD
SLFN-g3_helicase
nSTAND1
AAA_3
NRBF2
Motif
Other DBs
NCBI-GeneID:
100935358
NCBI-ProteinID:
XP_031801952
Ensembl:
ENSSHAG00000009652
UniProt:
G3W712
LinkDB
All DBs
Position
1:383526168..383564776
Genome browser
AA seq
433 aa
AA seq
DB search
MDEAVGDLKQALPCVSESPVINVEVHLRCNSTAKKEEIKLSVVKLLNRHNIVFGDYTWTE
FDDAFLSRNVQSVSIVDTELKVKERQPIDLSKCTLALHVFQLNEEGPSSENLEEESENII
AANHWVLPAVEFHGLWESLVYDVEVKSHLLDYVTTTLLFSDKNVDSNLIAWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSCRYQYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQELI
DDKEALVFVLIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSN
ITEKIDMAFVDRADIKQYIGPPSTAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
YVENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQTPTVSVEGFLQALSLVVDK
QFEERKKLSTCIG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcagtcggggacctgaagcaggcgcttccttgcgtgtcggagtcacccgtg
atcaacgtggaggtgcatctgcgctgcaacagcactgcaaaaaaagaagaaataaagctg
agtgttgtaaagctactaaatagacataacatcgtgtttggagattacacgtggactgaa
ttcgatgatgcttttctgtccagaaatgtgcagtctgtgtctattgttgatacagagtta
aaagtgaaagaacggcagccaattgacttgagcaagtgtactcttgcccttcatgtcttc
caactgaatgaagaaggacccagtagtgaaaatttggaagaagaatcagaaaatataatt
gcagcaaatcattgggtgctgccggcagttgaatttcatggcctttgggagagccttgtg
tatgatgttgaagttaagtcacatttgcttgactatgtgacgacaaccttattgttttct
gacaaaaacgttgacagcaacctaatagcctggaacagagttgttttactccatggtcct
ccaggaactgggaaaacatctttatgtaaagcattagcacagaaattgacaattagactt
tcatgcaggtatcaatatggccaattaattgagataaatagtcatagccttttctctaag
tggttctcagagagtggtaaactagtaacaaagatgttccagaagattcaagagttaatt
gatgataaagaagcactggtgtttgtactgattgatgaggtagaaagtctcactgcagct
cgtaatgcctgtagggcaggcactgaaccatcagatgcaattcgggttgtcaatgctgtt
ttgacacaaatcgatcagattaaaaggcattcaaatgttgttatattaacaacttcaaat
attactgagaaaattgacatggcttttgtggacagagctgatataaaacaatacattggg
cctccatctactgcagccattttcaaaatttatctttcttgtttagaagaactaatgaag
tgtcaaataatatatccacggcaacaactgttgactcttcgagaattagaaatgatcggt
tatgttgaaaataatgtatcaaagctaagtctactgttaagtgaaatttcaaggaaaagt
gaaggacttagtggccgagtcttgaggaaacttccttttctagcacatgcgctatatata
caaacaccgactgtttcagtggaaggattccttcaggccctttcacttgtagtggacaaa
cagtttgaagaaagaaagaagctttcaacttgcattggataa
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