Sarcophilus harrisii (Tasmanian devil): 100935370
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Entry
100935370 CDS
T02286
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
100935370 (RAI1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100935370 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
100935370
NCBI-ProteinID:
XP_031794242
UniProt:
A0A7N4PG71
LinkDB
All DBs
Position
1:232691791..232991256
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AA seq
2030 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQDSSRLENYRHQSQAGLSCERQRLLAKEYYSQQPYPAYD
SSASAAADKYHRGSKPLPGQPPLQGRPTFSSYSVPESSPYPARYSGEESLQTWGAQQQAL
AGGVAKYEENLMKKTAVPSSSRQYQEQSSQLPFRTHSLHLQQQQQQQQQQQQQQQQQQQQ
QLQQQQQLQQLQQQQQQQQNPLTYPKLQRQKIQNDIAPIPFPQGSHFPQHSQSFPTSSTY
SSAVQGGSQGAHSFKSCTAPSTQPHERSLASSASLTPGPRVQSLHSYQAGRISYDQQQQQ
QQQQQQQQQQQQQQQQQQQQAAALQGRHHAQETLHYQNIAKYQHYNQQGQSYCQPDTPVR
TPEQYYQTFSPSSSHSPARSMGRSPSYSSTPSPLMPNLENFQYSQQTLSTGAFPASITDH
SHFMPLLNPSPTDGASSVDAQAVNCKNLQKEKIPENLLSDLSLQSLTALTSQVENISNTV
QQLLMSKSTVPQKKGMKNLVPRTPEQLKGQHCSPESGSYSAEPVGTPLSEPLSSTPQSIH
AEAQEADYLSGSEDHLERTFLYCNQTRNSPARVNSNSKAKPESVSTCSVTSPDDMSTKSD
DSFQSLHSSLPLDTFTKFVASDRECPRLLLSALSQEELASEIIVLQEAISEKADKAWSES
PVLTKDPSKSSFSLENHNTCLDPVGKNTWSHPAEAETLPDPLHINKGSNTKDFSEELFED
PPVGFTMPEAKKLPCSLPYGPKPNLPDAPSNPGTTAFGCFPDTTTDSVGSGDNANPFAWP
EENLGDACPRWGLHPTELPKSLGRGKPPEGSSKEKTNDTVCMGFPEAEPVGEKEEVRDFK
HEEVRDVKEEDILGCQEANKADRWLEDSRHCCPAGDFSDISLLPSSERKDLEAEEYSSLC
ELLASPEQRPGLQDPSPPKTPLICTKEEPEGSLSPKANWVSPCRLSGESVILLGPAVGTE
SKVKSWFESSLSHMKPEEGATENESAPPDNIAPSAPLPGKLNKPALPENTLAKKGPMPRG
KSLRSRRVQRGLPEGEESGCKAPDLPKDLSLPEPCTGQPQGHTEGAGTPGQLGPAGRVVA
EGLPRMCTRSFTALNEPRTPGSHPPSLTGASSQPEKLGTKQRAGFKSGKRAGKLSPKVAS
SPSDPAALPVPSLAQENSSMGPKLKDAESPDIPAKDQRSMILRSRTKAQELFHPKRRRPT
EGRLPNCKTAKKLIPNNHLPPSFKMPGSAQKEGKASRRVKLPKPAPGVGGKLPERQLHSL
KRKSTFMSPIPAKKRNLILRSGGSPGSIKEEKAEPSSPSLFKRISSPKKAKAAKGTCEPA
LKAPPPETPNVCIKITSRAAFQGAMKTKVLPPRKGRGLKLEAIVQKITSPSLKKFACKTA
TAAAAAAAAAAAAAAAAAAVVAPTHSNPLSPSLPEKERALKKAGAGPAGGDARPLNPGLA
QKPPAAPGAEQLCRNASSRSLKGKLMNSKKLSSDCFKGEACSSPEAAQPQQEEQPQQPPG
GGEATKSLGLVTKKRSRKGKAAALGLAKLPLEKRAHLAPGLLLASRERAAVGGGLADGGE
DREGGGGKKGGLEDKGLGPEPSEGRASQPQTRAQKQPAGQASYNGGYSKRQRKRLTRGKA
KNVASQCKSRAKRRRQQQHAPPLDPAEPEIRLKYISCKRLRTDSRAPPFSPYVRVEKKDE
FTTTCTVVNSPGEEPKPRKEKPSSSSSSSSSSSSSSSSSSSSSSSSSAASPTTSSSALAT
LPGGASLQARAVLPLSSTMHLGPVVSKTLSAACLVCCLCQNPANYKDLGDLCGPYYPEDC
LPKKKSRLKEKARAEGPGEEAAPLERTLRGLESPCPAGPGKPPRPEAPAEAAKPSSLRSS
SRGLYRKLQSCYCCDEQRTEDEEAPAADKPRKHECSKVEAPAPELSGDTQEHWVHEGCAI
WTAGVYLVAGKLFGLQEAMKTAADVRCSSCQQVGATLGCCHKGCPQTYHYACASDTEAAV
VIYPPGSYLLHLDRRWRQAWAHFSPGAVTGPPRPARKRGTGPFLPLDLLT
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaagcagcagaactaccagcagact
tcacaagattcatcacgcctggagaattacaggcatcagagccaggcagggctgagctgc
gagcggcagcggctgctggccaaggagtactacagtcagcagccctacccggcttacgac
agcagcgcctcggcggccgccgacaagtaccaccggggcagcaagcccctccccggccag
ccgccgctgcaggggaggccgaccttctccagctacagcgtcccggagagcagtccctac
ccggctcggtactcgggagaggagagcctgcagacgtggggggcccagcagcaggccctt
gcagggggggtggccaagtatgaagagaacttgatgaaaaagacagcggttccctccagt
agccgtcagtaccaggagcagagctctcagctgcccttccggactcactccctgcacctc
cagcagcagcagcagcagcagcaacagcaacagcagcaacagcagcagcagcagcagcag
cagctgcaacagcagcaacagctgcaacagctgcagcaacagcagcagcagcagcagaac
cccttgacgtaccccaagctccaaaggcagaagatccaaaatgatatcgcccccataccc
tttccccagggctctcatttcccccagcattcccagtccttccctacttcctccacctat
tcttcggccgtgcagggcgggagtcagggagctcactccttcaaaagctgcaccgccccc
tccacccagccccatgagaggtccctggctagcagcgccagcctgaccccggggcccagg
gtgcagagcctgcacagctatcaggcaggcaggatcagctacgaccagcagcagcagcag
cagcagcagcagcagcaacagcaacagcagcagcagcagcagcagcagcagcagcagcaa
gcagcagctctccagggcagacaccatgcccaagaaacgctgcattaccagaacatagcc
aagtaccaacactacaatcagcagggccagagctactgccagccggacaccccggtgagg
acacccgagcagtactaccagaccttcagccccagctccagccactcgccggcgcgctcc
atgggccgctccccctcctacagctccacgccatccccgctgatgcccaacctggagaac
ttccagtacagccagcagaccctcagcacgggggccttccctgccagcatcacggaccac
agccacttcatgcccctgctgaacccttccccgacagacggggcgagctccgtggacgcg
caagccgtgaattgcaagaacttgcagaaggagaagatccctgagaatctgctctcggac
ctcagcttgcagagcctgactgctctgacttcacaagtggagaacatttccaacactgtg
cagcaacttctgatgtccaagtcgaccgttccccagaagaaaggcatgaagaacctcgtc
cccaggaccccagagcagctcaaaggtcagcactgcagcccggagagtggcagctactct
gcggaacccgtgggcacccctctgtcggagcctctcagcagcaccccacagtccatccac
gcggaagcccaggaggcagattacctgagtggttcagaagatcacctggaaaggaccttc
ctgtattgtaaccagactcggaacagccccgccagggtcaatagcaactccaaggccaag
cccgagtcggtctccacctgctcggtcacctctcccgacgacatgtccaccaagtcggac
gactccttccagagccttcacagcagcctgcccctggacaccttcaccaagtttgtggcc
agcgatcgggagtgcccccgtctgctgctcagcgcgctgtcccaggaagagctggcttcg
gagatcattgtgctgcaggaagccatcagtgaaaaggccgataaagcttggagcgagtct
cccgtcctgactaaggaccccagcaagtcctccttctctctggagaaccacaacacctgc
ctcgaccctgtgggcaagaacacctggtcccaccctgctgaggcggaaaccttacctgat
cccctccacatcaacaaaggcagcaacaccaaggacttcagcgaagagctcttcgaggat
cccccagtggggttcaccatgcctgaagccaagaaattaccctgttctctgccatatggt
cccaaaccgaatctcccagatgctccctctaaccctgggacaactgcttttggctgcttt
ccggatacaaccactgactcagtgggttctggtgataatgcaaacccctttgcgtggcca
gaggagaacttgggggatgcctgtcccaggtggggtctgcatcccacagagctccctaag
agcctgggtcgagggaagcctccagaggggtcgagcaaagagaaaacaaatgacaccgtt
tgtatgggcttcccagaggcagagccagtgggcgagaaggaggaggtgagagatttcaag
catgaggaggtcagagatgtgaaggaggaagacatcctggggtgccaggaggccaacaaa
gctgacaggtggctggaggacagtaggcactgctgcccggctggtgacttcagtgatatc
tccttgctgccctcctcagagagaaaagacttggaggcagaagagtactcctccctttgt
gagctcctggccagccctgagcagaggcctgggctgcaggacccatctccccccaagacc
ccattgatctgcactaaggaggagcccgaggggtctctcagtccaaaggctaactgggtt
tctccctgtcgcctctccggagagtctgtcatcctgctgggtccagctgtgggcacagaa
tccaaggtcaagagttggtttgagtcatccctgtctcacatgaagccggaggaaggggca
acagagaacgagagcgcacctccagataatatcgcgcccagtgcccctctgccaggaaag
ctgaacaagccggccttgcctgaaaataccctggccaagaaagggcccatgccgagaggg
aagagcctgaggagccgtcgagtgcagagagggctgccagagggagaggaatcgggctgc
aaggccccagacctgcccaaggacctttcactgccagagccctgcacagggcagccccag
ggccacacagaaggggccggcacccccggccagctgggcccagccgggagggttgtggcc
gaggggctgcccaggatgtgcacccgctccttcacagccctcaatgagccccgaacccct
ggctcccatccaccgagcctaaccggggcatcctcccaacccgagaagctggggacaaaa
cagagagccggtttcaagtctgggaagagagcaggaaaactgtcccctaaggtggcttct
agccccagtgaccccgccgctctgcccgtgcccagcctagcccaagagaacagctccatg
gggcccaagctgaaggacgccgagtccccggatatcccagcgaaggaccagaggtccatg
atcctccggtctcgaaccaaagcccaggagctctttcaccccaagcggaggaggccgacg
gaagggaggctgccaaactgcaaaactgccaagaaactcattcctaataaccacctacca
cccagcttcaagatgcctggcagtgcccagaaagaggggaaagcaagccggagggtgaag
ctccccaaacctgcgcctggtgtgggaggcaagctgccagagcgccagctgcactccctg
aagaggaagtccaccttcatgtctcccatcccagccaagaagaggaatctgattcttcgc
agcgggggcagccccgggagcatcaaggaggagaaggccgagccttcttcccccagcctc
ttcaagaggatctccagccccaaaaaagccaaggccgccaagggcacctgcgagcccgcc
ctgaaagcccctcctccggagacccccaacgtctgcatcaaaatcacctcccgggccgcc
ttccagggagccatgaagaccaaggtcctgcctccccgcaagggccgaggcctgaagttg
gaagccatcgtgcagaagatcacctctcccagcctaaagaagtttgcatgcaaaacagcc
acggcggcagcggcggcggcggcggcggcggctgcagcggccgcggccgccgcagcagtg
gtggctccgacccacagcaaccctctgagcccgtccctccccgagaaggagagggcctta
aagaaggccggggccggccccgccgggggagacgccaggcccctcaacccgggcctggct
cagaagcctcccgcggcccccggagccgagcaattatgcagaaatgccagcagcagatcc
ttaaaagggaaactcatgaacagtaagaagctgtcctccgactgtttcaagggtgaggcc
tgttcctctccggaggcagcgcagccgcagcaggaggagcagccccagcagccgcccggc
ggcggggaggctacgaagagtctcggcctggtgaccaagaagaggagccggaaggggaag
gcggccgccctgggcctggccaagctccccctggagaagcgagcccatctggcgcctggc
ctgctgctggcctccagggagagggcggccgtggggggaggcctggccgacggtggggag
gacagggaagggggaggagggaagaaaggcggcctggaggacaaaggcctcggcccagag
ccctcggagggccgggcgtcgcagccgcagacccgggcccagaagcagcccgccggccag
gccagctacaatggcggctactccaagcggcagcgcaaacggctcacgcgaggcaaggcc
aagaacgtggcttcccagtgcaagagtcgagccaaaaggcgaaggcagcagcagcacgcc
ccgcccctggaccctgccgagcccgagatccgcctcaagtacatttcctgcaaaaggctc
cggactgatagcagggctccacccttctccccctacgtcagggtggagaagaaggatgag
ttcactaccacctgtactgtggtcaactcccctggggaagagcccaagccccgaaaggag
aagccttcctcctcttcttcctcctcctcctcctcctcctcttcttcctcctcctcctcc
tcctcttcctcctcctcctcagctgcctcccctaccacctcctcctctgccctggccacc
ctccctgggggggcctccctccaggcccgggctgtgctgcccctctcctccaccatgcac
cttgggcctgtggtctccaagaccctgagcgcggcctgcctggtctgctgcctctgccaa
aaccctgccaactacaaagacctgggggacctctgtgggccctactaccccgaggactgc
ctgcccaaaaagaagtccagactcaaggagaaagccagggccgagggcccgggggaggag
gcggcgcccctggagagaacactcagaggcctggagagcccctgcccagccgggcccggg
aagccgcccaggcccgaggcccccgccgaggccgccaagcccagctccctgaggtccagc
tctcggggcctctaccgcaagctgcagagctgctactgctgtgacgagcagaggaccgaa
gacgaggaggcccccgcggccgacaagcccaggaagcacgagtgcagcaaggtcgaggcc
ccggcaccggagctgagcggagacacgcaggagcactgggtgcacgagggctgtgccata
tggactgctggcgtctacctggtggccgggaagctgttcggcctgcaggaggccatgaag
acggctgcagatgtgagatgttccagctgtcagcaagtaggtgccacccttggctgctgc
cacaaaggatgccctcaaacctaccactacgcatgtgccagtgacacagaggcagctgtt
gtaatctaccctcctgggtcttacctcctccatctggacaggagatggcgccaagcctgg
gcccacttctcacctggagctgtgaccggaccacccagaccggcaaggaagagaggaaca
ggacccttcctcccccttgatctgctgacctaa
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