Sarcophilus harrisii (Tasmanian devil): 100935374
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Entry
100935374 CDS
T02286
Symbol
VPS50
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin
KO
K23288
syndetin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shr04131
]
100935374 (VPS50)
Membrane trafficking [BR:
shr04131
]
Protein recycling
Others
EARP complex
100935374 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
ING
Motif
Other DBs
NCBI-GeneID:
100935374
NCBI-ProteinID:
XP_031805019
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All DBs
Position
1:complement(772410..803671)
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AA seq
899 aa
AA seq
DB search
MQKIKSLMARQGLKSPQDSVGELSPIENLRLPSKEELRELREQPIDPQAQQEIINSIEDV
YFSTDSFDIVKYEMEKLPPVLNLQELEAYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLATVICTNGRRHLNVAKEGFTQASLGLLANQRKRQLLVGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQQAASTFRHYSCISELDSKLQDTLEQIEEQLDVA
LSKICKNFDVAHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTADSYIPCLADLCKALWEVMLSYYRTMEWHEAHDNEGVTKAEGG
GAAEPDESNFDRSYVKKKLEHGLSRIWQDVQLKVKTYLFGTDMSTFKYDDFIFVLDIISR
GALGALVPGVLWGGPLSRGALGTLVRGVGPCPERLGPSCRGRLAAPRSPCGAATAGPGAP
ALMHQPRRRLPTRRTLRAERDYGQQATRLAVGGGAHARVPAPRDPGVPSAIGSALSTGSR
GSGPRAKVEGLGLALYSHGGLGWSPSPPRLSPLPHLSVSRETLRSRKKSDYSLNKVNAPI
LTNTTLNVIRLVGKYMQMMSMLKPIAFDVVHFLSQLFDYYLYAVYTFFGRNDSLESTGLG
LSSSRLRTTLNRIQESLIDLEVCTDSTGALTAGEERKEKVPSPHLSHLVVLTSGDTLYGL
AERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAG
KAIDYEQMLLLMASVKWDVKEIMSQHNVYVDTLLKEFEQFNRRLGEVSKRVRIPLPVSNI
LWEHCIRLANRTIVEGGGGQANVKKWATQGXALMQLDFQQFLMKLEKLTDIRPIPDKEF
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtccctgatggcccggcagggtctcaagagcccccaggacagcgtg
ggcgagctgagccccatcgagaacctgcggctgcccagcaaggaggagctgcgagagctt
cgggagcagcccatcgacccccaagcccaacaagaaatcatcaacagcatcgaggacgtg
tacttctcgaccgactcgtttgacatcgtgaagtacgagatggagaagcttcctcctgtt
ctcaatctgcaagaattggaggcgtacagagacaagctgaaacagcagcaggccgccgtc
tccaaaaaagttgcagatttgatccttgaaaagcagcctgcttatgtcaaggagctcgag
agagtgacctcgctgcagaccggcctccagctggcgaccgtcatctgcaccaacggaaga
aggcacctgaacgtcgccaaggagggttttactcaggccagcctgggcctcctggccaac
cagaggaagcggcagctgctggtgggcctgctgaagtccctgaggaccatcaagacgctg
caaaggacggatgtgcgcttgagcgagatgctggaggaggaagattaccccggggccatc
cagctttgcctggagtgtcagcaggcggccagcaccttccggcactacagctgcatcagt
gagctggactccaagctgcaggacaccctggagcagatcgaggagcagctggatgtggcg
ctgtccaaaatctgcaagaactttgatgtggcgcattacaccaaggtgcagcaggcctac
cggctgctggggaagacgcagaccgccatggaccagctgcacatgcacttcacccaggcc
atccacaacaccgtgttccaggtggtcctgggctacgtggagctttgtgccggcaacacg
gacaccaagttccagaagctccagtacaaggacctctgcacgcacgtgacggccgacagc
tacatcccgtgcctggccgacctctgcaaagccttgtgggaagtcatgctcagctactac
aggaccatggagtggcacgaggcgcatgacaatgagggcgtgaccaaggccgagggaggt
ggcgcggccgaacctgacgagagcaattttgaccgcagttatgtgaagaagaagctggaa
cacggactgtcgcggatatggcaggacgtccaactcaaagtgaaaacctacttgtttggg
acggacatgtcgaccttcaagtacgacgacttcatctttgtcctggacataatcagcagg
ggtgctctgggggcccttgtccccggggtgctctgggggggtcccttgtcccggggtgct
ctggggacccttgtccggggtgtgggcccctgtccggagaggttgggcccatcctgtcgg
ggtcgtctggcggccccccggtccccctgcggcgcggcgacggccggcccaggcgccccc
gcccttatgcatcagccgagacgccgcttaccgacgcgacgcacgctccgagctgagcga
gactacgggcagcaggcgacccggctggcagttggggggggggcacacgccagggtcccg
gcaccaagagacccgggtgttccgtctgccataggctcggcgctcagcactggctcccgg
ggctctggtcccagggccaaggtggaggggttgggcctggctctctacagccatgggggg
ctggggtggagcccctcccccccccgactctctcccctcccccatctcagcgtttcccga
gaaaccttaaggagccggaagaagtcggactacagcctgaacaaggtcaacgcccccatc
ctgaccaacaccacgctgaacgtcatccggctggtcgggaaatacatgcagatgatgagc
atgctcaagcccatcgccttcgacgtggtccacttcctgtctcagctctttgactactac
ctctacgccgtctacaccttcttcggccgcaacgactcgctggagtcaacgggcctgggc
ctgagcagcagccgcctgcggaccaccctgaaccggatccaagaaagcttgattgacctg
gaggtttgcacggactccacgggtgccctcacggcaggtgaggagaggaaggagaaggtg
ccgagtccacacctcagtcacctcgtggtcctgacgtccggggacacgctgtatgggctg
gcagagagagttgtcgccacagagtctttggtcttcctggctgagcagtttgagttcctg
cagccccacctggatgccgtgatgccggcggctaagaagcccttcctgcagcagttttat
tctcagacggtctcgaccgccagcgagctgcgcaaacccatctactggatcgtggcgggc
aaggccatcgactacgagcagatgctgctgctgatggccagcgtcaagtgggatgtgaag
gagattatgtcccagcacaacgtctacgtggacactttgctgaaggagtttgagcagttt
aaccggcggctgggcgaggtgtccaagagggtccgaatccccttgcctgtgtccaatatc
ctctgggagcactgcatccggctggccaacaggaccattgtggaggggggagggggccag
gccaacgtgaagaagtgggcaacccaggggnnggccttgatgcagctggacttccagcag
ttcctcatgaagctggagaagctgacggacatccggcccatcccggacaaggagttctga
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