Sarcophilus harrisii (Tasmanian devil): 105749242
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Entry
105749242 CDS
T02286
Symbol
SIGLEC1
Name
(RefSeq) LOW QUALITY PROTEIN: sialoadhesin
KO
K06548
sialoadhesin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105749242 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
shr04090
]
105749242 (SIGLEC1)
04091 Lectins [BR:
shr04091
]
105749242 (SIGLEC1)
CD molecules [BR:
shr04090
]
Proteins
105749242 (SIGLEC1)
Lectins [BR:
shr04091
]
I-type lectins (Siglecs)
105749242 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_5
Ig_CD22
C2-set_2
C1-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
105749242
NCBI-ProteinID:
XP_031805604
LinkDB
All DBs
Position
2:complement(21812315..21861664)
Genome browser
AA seq
1704 aa
AA seq
DB search
MLLLTWLLLLGSAFQQGLGSWKVNNPENLQGVSGSCVVIPCTFNFPNDVNPNQGIIAIWY
RDYADPERKTVVSHSGDPAQVGSRYQGRAVFLGKPEQKTCNLLMRELSPKDNGDYTFRFE
IIGGDKWSAKRSTTIKVIDEPSSPTIAXPTHLQEDTQVTFSCSTPMCVLKXQEPLSWHGQ
DPVRSNTSELRVLEPAGVSYRQSLSVALSWRDHGRLLSCQFSGAGKQSQGEIRLQVKFAP
KGVKVSLKPSAQNIHLGDSFTLTCHVNDSYPKPTVFRWFKDGALHKANQEVLQVSKATWK
DHGRYSCKAENTLGTGTADPITVPIFDPLIQVRPPGTIQEGQAVSLTCALPGGDSQNASY
SWFKNNLWLEDVAVRTLTYARISSADSGFYFCTVQNSMGVKASPPTNLVVTYPPRVPVLT
SFLETQKAQRAIIHCSVDSEPQANLTLWHAGRPLVSSTSQDTPGQRFSVTSGHNSLRLSI
WGLEADDGGNYTCEAVNVLGKAVSSHELRADTAWVGIHPASQVVEGEEVTLSCVTAPGDR
PYTLYTWYRNGERLKEGPLGLLTFPRVLSANSGSYHCQAQDSLGSSRTSPPAALTVIYPP
RQPSLTTLVATEAGRLGLLSCTVDSDPVADLRLFRGDQLVAASRDEGRGGPRRPRVQATS
GPNSLRVEIRDVVLEDEGEYTCKATNTLGNSTVSAMFETQSTQLVIFPSATVKEGGGVNL
TCVVNRESNNSTTNFTWYWNGAPWAQGSQGAVVLQPVTRTHAGLYSCHVSTQIGERHSPA
VALQVLYPPDSPHLSVFLDTTGDQGAVFLCTVSSSPPASITLFHGEKLVASSLGSKTLEG
RQPWVEASPNSLRMEIKDLRLEDAGNYQCRATNAHGSANSTIFFQVHAAWVQVLPSLEVK
EGEAVSLSCKVTGGAPDGTTYHWYRDSRHLPESIFSTLHFPSITAEQGGAYHCQARAPGG
ATSLASPVSLHVSYPPRQPTLTALRGLEAGRLGLILCQVDSDPQAQLRLLKGDRLLASSQ
SSVGVNSSLVTRAFNVLRVEIPNVKLEDEGEYNCEASNIFGTSTASVAFSAETVVVQVLP
SLTVREGQSVNLTCVVSAAAVTELNYTWYRNGQWVAGGSGSSSIFLPNVSAADAASYRCA
VDTYKGGIRLSSPKSLSVLYPPRALRLTSLLESQAGQPAVLLCTVDSQPPATLALSWAGQ
LLASSSIGQTRMGASSTPNTLRLELQELKAPGSGLYTCFAKNSLGQANTSLELHLEVTRV
SIAPSNEVPEGTPVSLTCEDPAAKPPTVYTWYHNGRWLQEGPSHILQLPGTSRAHDAGAY
SCTARDARSVRSSQPASLRRLYAPRDAFLTSFLDTRAGRLTVLQCTVDSEPPAKLSLSHD
GELVASGQNPFGSLVGRSRVHTTHNTLRLELWHVNLEDEGDYLCSAQNALGSITTTGQLQ
GEGLRITVEPDLEIHEGDSLNMTCLLTSQVQEENTTYTWSWNSRWLQEGPEPTLRFSQVA
SEQAGVYQCHAKGSFGSVSSAPVSLKVLYAPRIPAVTFFLEPETGLWGILHCHVDSEPRA
ELALYHGSQFIASTHPGSRHPPHFQVSTSYNTLRVDVQDMSSTDQGDYVCLASNALGSAS
SSVYLGRRVLDHLSLYQLLFIIFMVLFCCLLLLLGMVTIHIWKRKNLFYKLNADENLVEM
ASQKEKPQRSYMRLRNSKDPMMNQ
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttttgacctggctgctcctccttgggtctgccttccaacaaggcctgggttcc
tggaaggtgaataaccctgagaatcttcagggtgtcagtggctcctgtgtggtcatcccc
tgcacttttaactttcctaatgatgtgaacccaaatcaaggcattattgccatctggtac
cgagactatgcagatcctgagagaaagacggtggtaagccattccggagacccagcacag
gtggggtcaaggtaccaaggccgggctgtgtttctggggaaacctgagcagaagacctgc
aatctactgatgcgggaactcagtcccaaggacaatggggactataccttccgatttgag
atcattgggggagacaaatggtctgccaagaggagcaccacgatcaaagttattgatgaa
cccagcagccccaccattgccntccctactcatcttcaggaagacacccaagttaccttc
agttgttctacccctatgtgtgtcctgaagnnacaagagcccctttcctggcatggtcag
gatcctgtgcgctccaacactagtgagctccgagtactggaacccgctggggtcagctac
cgacaaagcctcagcgttgccttatcctggcgcgaccatggccggctgctcagttgccaa
ttctctggggcagggaagcagagccagggggagatccgcctccaggtgaagtttgccccc
aaaggagtgaaggtctctctaaagccctccgcacagaacatccacctgggggattccttt
accctcacctgtcacgtcaacgacagctaccctaagcccaccgtcttcaggtggtttaag
gatggagccctccataaggccaatcaagaagtgctccaggtgagcaaggccacatggaag
gaccacgggcgctactcctgcaaggcggagaataccttgggcactggaacagctgatccc
atcactgtccctatctttgatccactgatccaagtgcgccctccgggaaccatccaggaa
gggcaggcagtgtctctcacctgcgccctgcctgggggggacagccagaacgcctcctac
agctggttcaagaacaacttgtggctcgaggatgtggccgtccggaccctgacgtacgcc
cgaatcagcagcgccgactccggcttctacttctgcacggtgcagaattccatgggggtc
aaggcctccccacccactaacctggtggtcacctatcccccgagggtccccgtgctcacc
tccttcctggaaacccagaaggcccagagagccatcatccactgctccgtggacagcgag
ccccaagccaacctgaccctgtggcacgccggccggccgctggtctcctcgacctcccag
gacactcccggtcagcgcttcagcgtcaccagcggccacaactccctgcgtctgagcatt
tggggcctggaggctgacgatggtgggaactacacgtgtgaggccgtcaacgtcctcggg
aaggccgtctccagccatgagctcagggctgacacagcctgggttggaatccatccagca
tcccaggtggtggagggcgaggaagtgactctgagctgtgtgaccgccccaggggaccgg
ccctataccctctatacctggtaccggaatggcgagaggctgaaggaggggccccttggt
ctcctcacctttcccagggtgctcagcgccaactcgggctcctatcactgccaggcccag
gatagcctgggcagcagccggacctcccctcctgctgcccttactgttatctaccccccg
cgacaaccttcgctcactaccttggtggccacggaggccggcaggctgggcctcctctcg
tgcacggtggacagtgacccggtggccgacctgaggctgttccgaggagaccagcttgtg
gccgcctctcgggacgagggccgaggagggcccaggcgtccccgggtccaggcaacctct
gggcccaattccctccgcgtggagatccgcgacgtggtgctggaggacgagggggagtac
acgtgcaaagccaccaacacgctgggcaattccacagtctctgccatgtttgagacccag
agtacccagctcgtcatctttccatcagctaccgtgaaggagggcggaggggtcaatctg
acctgtgtcgtgaatcgggagtccaacaatagcaccacaaatttcacttggtactggaac
ggggccccgtgggcccagggatcacaaggagctgtggtccttcagcctgtgactaggaca
catgccggcctgtactcctgccatgtcagcacccaaataggggagagacactcccctgcg
gtggccctgcaagtgctgtaccctccagattccccccatctctctgtcttcctggacacc
actggggaccaaggggccgtgttcctctgcactgttagcagcagcccccctgcatcaata
accttgttccatggtgagaagttggtggcatccagccttggctccaagacattggaaggc
aggcaaccctgggtagaggctagccctaactccctcagaatggaaatcaaggacctgaga
ctagaggatgctgggaactaccaatgccgggccactaatgctcatggctcagccaacagc
accattttttttcaagttcatgctgcttgggttcaggtattgccatccttggaggtcaag
gaaggggaagcagtgtccttgagctgcaaagtgacaggtggggctcccgatgggaccacc
taccactggtaccgcgacagtcggcacctcccagagtccatcttttccacgctccacttt
ccttccatcactgctgagcaggggggtgcctaccactgtcaggcccgggccccaggaggg
gccaccagtctggcctcccccgtcagccttcatgtgtcctaccccccacgacagcctacc
ctcacggccttgcgaggactggaggctgggaggctgggcctcatcttgtgccaagtagac
agtgatccccaggcccagctgagactgctgaagggcgaccggctcctggcctcctcccaa
agcagcgttggagtcaactcttctctagtcactcgggctttcaatgtcctccgggtggag
atcccaaatgtgaagcttgaggatgaaggagaatacaactgtgaagccagcaacatcttt
gggacttcaacagcttctgtggccttcagtgctgaaaccgtggtggtccaggtgctgccc
tctctgaccgttcgggagggccagtctgtgaacttgacttgtgtggtctcagctgccgct
gttactgagctcaactacacatggtaccggaatgggcagtgggtggctggaggctctggc
tcctcctccatcttcctccccaatgtttctgctgctgatgccgcttcttaccgctgtgct
gtggatacttataaaggaggcatacgcctctcctcccccaaaagcctctctgttctctac
ccacctcgggcactgcgtctgacatctctgctggaaagccaggcaggacagccagccgtg
ttgttgtgcactgtggacagccagcctccggccacactggctttgagttgggctggtcaa
ctcctggcctcgtcttccatcgggcaaaccagaatgggggcatcctccacccccaatacc
cttcgcctcgagctccaggagctgaaggcccctgggagtggcctctatacctgttttgct
aagaactctctgggccaggcaaacacgtccttggagctacatctagaagtcaccagagtg
tccatagctccgtccaatgaggtgcctgagggtacacctgtcagcctgacgtgtgaggac
cctgctgccaagccacccacagtctacacctggtatcacaatggccgttggctccaggag
gggccctctcatatcctccagctccctggcacttccagggcccatgatgccggtgcctac
tcctgcactgctcgagatgcccggagtgtccgaagttcccagcctgcttctctgcgacgt
ttatatgcccctagagatgcattcctgacctctttcttggatacccgggctggtcgattg
actgtgttgcagtgtaccgtggacagtgagcctcccgcaaaactgagtctgtcccatgat
ggtgaactggtggcttctggtcagaatccctttgggtcactggtgggcagaagccgtgtc
cacactacccataatacccttcggctggagctgtggcacgtcaatttggaggatgaggga
gactacctctgctctgcccagaatgctcttggctccatcactaccactggacagttacag
ggagaaggtcttcgcatcacagtggagccagacttggagattcatgaaggagattccctc
aatatgacctgtctgctgaccagccaggtccaagaagagaacaccacttacacgtggtcc
tggaattcccgatggttgcaggaggggccagagcctacactcaggttttcccaggtggcc
agtgagcaggctggggtgtaccaatgtcatgctaaagggtccttcgggagtgtctcctca
gcccccgtgagcctcaaagttttatatgcaccacggatacctgctgtgacttttttccta
gagccagagactggtctctggggaatcctgcactgtcatgtggatagtgagccccgggct
gagctggccctttatcatggaagccagtttattgcttctacccatcctggaagccgtcat
cctccccactttcaagtatcaacctcctacaatactctgagggtggacgtccaggatatg
agttccacagaccagggagattatgtatgcttggcatccaatgctctgggttctgcttca
tcttctgtgtaccttggacgaagagttcttgaccacttgagcctgtatcagctgctcttt
atcatcttcatggtgctgttttgctgcctattactgctcttgggtatggtgaccattcac
atctggaaaaggaaaaacctcttctataagttgaatgcagatgagaacctggtagagatg
gcttcccagaaagagaaacctcagaggagctacatgaggttaagaaactccaaagatcca
atgatgaatcagtga
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integrated database retrieval system
