Sarcophilus harrisii (Tasmanian devil): 105750193
Help
Entry
105750193 CDS
T02286
Symbol
SIX5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
105750193 (SIX5)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
105750193 (SIX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
105750193
NCBI-ProteinID:
XP_031819708
UniProt:
A0A7N4PTU0
LinkDB
All DBs
Position
3:593031870..593036067
Genome browser
AA seq
756 aa
AA seq
DB search
MATFRAEPSAGPAGGGEAAATAGAEDEEEEEEEEEEGEAEADEQTARRLLQTLQAAEGEA
AAAAEGAGAPLEPPPPAAAAPAPGPGGAPGGGLRFSAEQVSCVCEALLQAGHAGRLGRFL
GALPPAECLRGGSDALLRAQALVAFQRGDFAELYRLLESRPFPAAHHAFLQDLYLRARYR
EAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPAPDE
KRRLAALTGLSLTQVSNWFKNRRQRDRTGPGPGGSGTVAAAAAAPGRSESDGNPSTEDES
SHGAEDLDTGAAVAAGGAEVPAPGSVFLAGPAAPSGPPGAAPILLNGSFLTAASSPAVLL
NGGSVIINGLALGEAPGLAPLLLTGAAGGGGPAPSSPQPPTALPPLLQVPQSGDLKAEDA
QPGDGGSKGNQASGEEALPLQGLSLSQVVPGPQPAAPFPPAVVTSAGPGPQVVPLSPPGQ
VAPVPAPQVVPLSPSGPVYPGASPLVSLPQVVPTSQVVTLPQGVGSLQLLTGPASPVKVA
AATGAALGQANVHLINPGMGVAALQLPTAAPGNFLLANPVSSSPIVTGMTLQQGKIILTA
TFPASMLVSQALPPTAASLALPVKQEAPAPVAEGPALATAAPGPPLPTLSAQPQVCVAPV
AAGPAFSSDSSGLLSSVPVPTAPSWPGGLELGVGTEGLFEMEKGLGTPAPHSLLRLPDGE
GLLLGGPGAEEGDELEPEDKVLTQLQSVPVEEPLEL
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttccgtgcggagccgagcgcgggcccggcgggtggcggggaggctgcggct
acggccggggcggaggacgaggaggaagaggaggaggaggaggaggagggggaggcggag
gcggacgagcagacggcgcggcggctgctgcaaaccctgcaggcggccgagggcgaggcg
gcggcggcggccgagggcgcgggggcccctctggagccgccgccccccgccgctgccgcg
ccggctccgggccccggcggagcccccggcggcgggctgcgcttctcggccgagcaggtg
tcgtgcgtgtgcgaggccctgctgcaggcgggccacgcgggccgcctgggccgcttcctg
ggcgcgctgccgcccgccgagtgcctacgtggcggcagcgacgcgctgctgcgcgcccag
gcgctcgtggccttccagcgcggagacttcgccgagctgtaccggctgctggagagccgg
cccttccccgccgcgcaccacgccttcctgcaggacctctacctgcgcgcccgctaccgc
gaggccgagcgcgcccggggccgcgcgctgggcgccgtggacaagtaccgcctgcgcaag
aagttcccgctgcccaagaccatctgggacggcgaggagacggtgtactgcttcaaggag
cgctcgcgggccgcgctcaaggcctgctaccggggcaaccgctaccccgcgcccgacgag
aagcgccgcctcgccgcgctcaccggcctctcgctcacgcaggtcagcaactggttcaag
aaccggcgccagcgcgatcggacggggccgggccccggcgggagcgggacggtggcggcg
gcggcggcggcgcccggcaggagtgagtcggacgggaaccccagtacagaagacgagtcc
agccacggagccgaggacctggacacgggagcggccgtggctgccgggggcgcggaggtg
ccggctcccggttctgtgttcctggccgggccggcggctccttcgggtcccccaggggcg
gcacccatcctgctcaatggcagcttcctgacggcggccagctccccggctgtgctgctc
aacgggggctcggtcatcattaacgggctggctctgggggaggccccaggcctggcccca
ctcttgctcaccggggccgctggaggtggggggccagccccctccagcccccagcccccg
actgcactcccccccctgctccaagttccccagtctggagacctgaaggctgaagatgcc
cagcctggagatgggggctccaaagggaaccaggcatctggggaggaagccctgcccctc
caggggctgtccctctcccaagtggtcccgggcccgcagccagcggcccccttccctcct
gccgtggtgacctctgccgggccggggccccaggtggtcccactgtcacccccaggccag
gtggcccctgtaccagccccccaggtggtcccactctctccatcaggccccgtctaccct
ggggcctcccccttggtctcccttccccaagtggtgcccacctcccaggtggtgactctg
ccccaaggtgtagggtccctccagctgctgactgggcccgccagccccgtcaaggtggcg
gcagcaacaggggccgccctgggccaggccaacgttcacctcatcaacccgggaatgggg
gtcgcagccttgcagttgcccacggccgccccagggaacttcctcttggcaaacccagtt
tccagcagccccatcgtgacgggaatgacgcttcagcagggcaagatcattctgacggcc
accttcccggccagcatgctggtctcgcaggccctgccgcccactgccgccagcctggcg
ctgcccgtcaaacaggaagccccggctccggtggccgaggggccggccctggccacggcg
gcccccggcccgcccctccccaccctctcggcccagccccaggtgtgtgtggctccagtg
gcagctggcccggccttctcctccgactcctccggcctcttaagcagcgtcccagtcccc
accgccccttcttggcctgggggcctggagttgggggtgggaactgaggggctctttgag
atggagaaagggctagggacgcctgccccccattccctcctgaggctgcctgacggggag
ggcctcctgttggggggcccgggggccgaggagggagatgaactggagcccgaggacaag
gtcttgacccagctccagtcggtgcccgtggaggagccgctggagctgtga
DBGET
integrated database retrieval system
