Sarcophilus harrisii (Tasmanian devil): 105750195
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Entry
105750195 CDS
T02286
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
105750195 (SHANK1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PDZ_6
PDZ
SH3_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
105750195
NCBI-ProteinID:
XP_031817695
LinkDB
All DBs
Position
3:complement(609113897..609158437)
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AA seq
1589 aa
AA seq
DB search
MAPLAFAKNSKLCFPVLLSGPVLSIGEGGFWEGQVKGRVGWFPSECLEEVANRSQEGKQE
SRSDKAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSEGFGFVLRGAKAQTPIEEF
TPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLM
VKVVMVTRHPDMDEAVHKKVPQQAKRLPPPAISLRSKSMTSELEEMVSPWKKKSDYEQAP
MPSVEKKRTVYQMALNKLDEILAAAQQTISASEGPGPGGLPSLGKHRAKGFFATESSFDP
HHRSQPSYERPSYLPPGPGLMLRQKSIGAAEDDRPYLTPPAMKFSRSLSVPGSEDIPPPP
TTSPPEPPYSTPPAPSSSSGRLTPSPRAGAFNPGSGGPLPSSSPASFDGPTLPDSRPSGR
DKGLYHAGPGVLPPAHHHPPHHHHHHAPPPPPHPHHAHPPHPPEMETGGSPDDPPPRLAL
GPQPSLRGWRGGGPSPSPGGPGPSPSHHAAAGGGGGGGGGGSSPAPALRYFQLPPRAASA
AMYVPARSGRGRKGPLVKQTKVEGEPQKVSPGAGPAPAPPAPAAPQQAAEKNSIPIPTII
IKAPSTSSSGRSSQGSSTEAEPPAPADAGPSPASPVPAPSPGPPSSPLPAPPSPSGPATL
DFTSQFGAALVGAARREGGWQNEARRRSTLFLSTDAGDEDGGEAGLGGSAAPGPRLRHSK
SIDEGMFSAEPYLRLEAGGGGAYGAYGPGRAYGGGGGGGGGGGVSAFTSFLPPRPLVHPL
TGKALDPASPLGLALAARERALKESSEGGSGLPQPPPRPPSPRYEAPLPPPPHPHHAHPL
PHHEPVLRLWGAPPPEPGRRELGYRPGLGSQEKPLPASPPAARRSLLHRLPPGPPGVGPL
LLQLGPEPSPLPPAAKSWRGGGGPDDSERLPLHVRFLENCEPRGGGRGVPSEDAAPGPPQ
ASASSPRSREENGLPLLVLPPPAPSVDVEDGEFLFAEPLPPPLEFSNSFEKPESPLTPGP
PPPLPDPPSVATATAAAPAPGPPPAAASGPALDSTASSLTSYDSEVATLTQGAAPGPGDP
PVPGPQVPAAPAPAAPAAPGPGSGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSL
SAEGGGGSGGGGGGGVGGGGGGGGGGGPELLDTYVAYLDGQAFGGGGGVGPPYPPQLMTP
SKLRGRALRPGPGGGLRDPATPTSPTVSVAGADGLLALSGCGGPQPPGSSDTDGAPGPSG
ATSLPRKLLPWEEGPGPPPPPLPPLPGPLSQPPPSALATVKASIISELSSKLQQFGGAAA
GGALPWARGGSGGGGDNHGGPSYDRTASLQRQRLADDPPSSLLSKPVSSLFQNWPKPPLP
PLPSGSGVTPASGGTGAGAPSPSSSSSSRHLQGVDFEMRPPLLRRAPSPSLLPPSDHKVS
PAPRPSSLPILPSGPLYPGLFDLRGSPTGGAGGASDPFAPVFVPPHAGMAGSLGGALAGA
SRSLSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPAL
TKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattggccttcgctaagaactcgaaactgtgcttccctgtcttgctctctggt
ccagtgctcagcatcggggaaggaggcttctgggaaggtcaggttaaaggtcgagttggc
tggttcccctccgagtgcctagaggaggtggccaatcgctcccaggagggaaagcaagaa
agtcgaagcgacaaagccaaaaggctcttccgacattacaccgtgggctcttatgacagc
tttgacgcccccagtgactacatcattaaggagaagaccgtcctgctacagaagaaggac
agtgaggggttcggttttgtgctgcggggggccaaggcgcagacccccatcgaggagttc
actcccaccccagcgttccctgcccttcagtaccttgaatctgtggatgagggcggtgtg
gcttggagagcaggacttcggatgggggacttcctcatcgaggtgaatggacagaatgtt
gtcaaggttgggcatcggcaagtggtcaatatgatccgccagggtggcaacaccctgatg
gtgaaggtggtgatggtcacccggcacccggacatggacgaggctgtccacaagaaagtg
ccccagcaggctaagcgtctcccaccccccgccatctcgctgcggtctaagtccatgact
tcggagctggaggagatggtttccccctggaagaagaagagtgattatgagcaggctccg
atgcccagcgtggagaagaagaggacagtctatcagatggccctgaacaaactagacgag
atactggcggctgcccagcagaccatcagcgcgagtgaggggcccgggccgggcggcctt
ccttctctgggcaaacaccgagccaagggcttcttcgccaccgagtccagctttgatccc
caccaccgatcccagcctagttacgaacggccatcttacctgccccccggacctggtctc
atgcttcgacagaagtccattggggccgctgaggatgacaggccgtacctgacgcccccg
gctatgaagttcagccgaagtctgtcggtcccgggctcggaagatatcccccctcccccg
acgacgtccccgcccgagcccccttacagcaccccgccagccccgtcctcctcttccggc
cgactcactccttccccccgggctggggcattcaacccagggagcggaggccctctgcct
tcctcctcccccgcctcttttgacgggcccaccctccccgactcccggccttcgggccga
gataagggtctctaccacgcagggccgggagttctgcctccagcccaccaccatcccccg
caccatcaccaccaccatgccccgcccccgccaccccacccccaccacgctcacccgccg
cacccccccgagatggagaccgggggctccccggacgaccccccgcctcgcctggccctg
ggcccccagcccagccttcggggctggcggggcggtggcccgagtccgtctcccggcggc
cccgggccctccccctcgcaccacgccgccgccggcggcggcggcggcggcggcggcggg
ggctcatcccccgcgccggccctgcgctatttccagctcccgcccagggcggccagcgca
gccatgtacgtccccgcccgctcgggccggggtcgcaaaggccccctggtcaagcagacc
aaggtggaaggggagccccagaaggtcagcccgggggcgggcccagccccggcgcccccg
gcgccagccgccccgcagcaggcggccgagaagaattccatccccatccccaccatcatc
atcaaagccccgtccaccagcagcagcgggcgcagcagccagggcagcagcacggaggcc
gagcccccggccccggccgacgccggcccctctcccgcctccccggtgccggccccctcc
ccggggcccccgtcatctcctctgcccgctccgccctcgcccagcggcccggccaccctg
gacttcaccagccagttcggggccgccctggtgggggcggcccggcgggaggggggctgg
cagaacgaggcccgccggcgctccaccctcttcttgtccaccgacgccggggacgaggac
ggcggggaggctggcctgggcggctcggctgcgccggggccgcgcctccgtcactccaaa
tccatagacgagggcatgttctcggccgagccctacctgcgcctggaggcgggcggtggc
ggggcctacggggcctacgggcccggccgagcctacggcggcggcggcggcggcggcgga
gggggcggggtcagtgccttcaccagcttcttgcccccgcgcccactagtccatccgctc
accggcaaggctctggaccccgcgtcgcccctcgggctggctctggcagcccgagagcgg
gcgctgaaggagtcctccgagggcggtagcggccttccgcagccccctcctcggcccccg
tcgccccgctatgaggccccgctccccccacccccgcatccccaccacgcgcacccccta
ccccaccacgagccagtgctgcgcctctggggcgccccgccccccgagccagggcggagg
gagctaggctaccggcctgggctcgggagccaggagaagcccctgcctgcgagtcccccg
gcggcgcgccgctccctgctgcaccgcctccctccaggccccccgggggtgggacccctg
ctgctccagctggggcccgagcccagcccgctcccacctgcggccaagagctggcgcgga
ggcggcggccccgacgactcggagcgcctccccttgcacgtgcgcttcctggagaactgt
gagccccggggcggcgggcggggggtcccctctgaggacgcggccccggggcccccgcag
gcctccgcctcgtccccccggagccgggaggagaacgggctgcccctgctagtcctgccc
ccgcccgccccgtcggtggacgtggaggatggcgagtttctctttgcggaaccgctgccc
ccgcccctggagttctccaacagcttcgagaagcccgagtccccgctgacgcccggccct
ccgcccccgctgcccgacccgccttccgtagccactgccaccgccgcggccccggccccg
ggccctccccccgcggcggcctccggcccggcgctggattctaccgcgtccagcctgacg
tcctacgacagcgaggtggccacgctgacccaaggagccgcccccggcccgggcgacccc
cccgttcccgggccccaagttcccgcggcgcccgcccccgcagcccccgcggcccctggc
ccgggctcgggtcctgacccgccgcctggcacagactcgggcatcgaggaggtggacagc
cgcagcagcagtgaccaccctctggagaccatcagcagcgcgtccacgctgagcagcttg
tcggccgaaggcggcggcgggagcggcggcggcggcggcggcggcgttggggggggcggc
ggcggcggcggggggggcggccccgagctcctggacacctacgtggcttatctggacggc
caggctttcgggggagggggcggggtcggcccgccctatcccccgcagctgatgacgccg
tccaagctgcggggccgggccctgcgacccgggccgggcgggggcctccgggatccggcc
acccccaccagccccacggtgtccgtggcgggcgccgacggcctgctggccctgagcggc
tgcggaggcccccagccgccgggctcctccgacaccgacggggcgccaggcccctcggga
gcgacctccctgccccgaaagctgctaccctgggaggaagggccaggcccgcccccacct
cccttgcccccgctgcccggacccctgtcccaaccgccgccctcggccctggccacggtc
aaggcgagcatcatcagtgagctgagctccaagctgcagcagtttgggggcgccgcggcc
ggcggggccttgccctgggcccgaggaggcagtgggggaggtggagacaaccacggaggc
cccagctatgaccgcactgcctccctgcaacggcaaaggctggcggatgaccccccgtcc
tcgcttctctccaaacccgtcagcagcctgttccagaactggcccaagccgccgctgcca
ccgctcccctcagggtctggggtgaccccggcatctgggggaaccggcgccggggcgccc
tcgccgtcctcatcttcatccagccgccacctgcagggcgtggactttgaaatgcgcccc
cctctcctccgacgcgcccccagcccttccttgctgcccccctcggaccacaaagtcagc
ccggctccccggccctcttctctgcccatcctgccctccgggcccctgtatcccggcctc
ttcgacctccgaggctcgcccaccggaggggctgggggcgcctcggaccccttcgctccc
gtcttcgtgcccccgcacgcggggatggcggggagcctgggcggggcgctggccggggcc
tcccgctcgctgtcgcccacccgcctgctctccttgcccccggacaagccgttcggagcc
aagccgctgggcttctggaccaagttcgacgtggccgattggctggagtggttgggcctg
gcggagcaccgcgctcgcttcctggaccacgagatcgacggctcccacctgcccgccctg
accaaggaggactacgtggacctaggcgtcacgcgggtggggcaccgaatgaacattgac
cgtgctctcaagttcttcctggagaggtga
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integrated database retrieval system
