Sarcophilus harrisii (Tasmanian devil): 111719477
Help
Entry
111719477 CDS
T02286
Symbol
TNNC1
Name
(RefSeq) troponin C, slow skeletal and cardiac muscles isoform X1
KO
K05865
troponin C, slow skeletal and cardiac muscles
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr04020
Calcium signaling pathway
shr04260
Cardiac muscle contraction
shr04261
Adrenergic signaling in cardiomyocytes
shr04814
Motor proteins
shr04820
Cytoskeleton in muscle cells
shr05410
Hypertrophic cardiomyopathy
shr05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111719477 (TNNC1)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111719477 (TNNC1)
04820 Cytoskeleton in muscle cells
111719477 (TNNC1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111719477 (TNNC1)
04261 Adrenergic signaling in cardiomyocytes
111719477 (TNNC1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
111719477 (TNNC1)
05414 Dilated cardiomyopathy
111719477 (TNNC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shr04812
]
111719477 (TNNC1)
Cytoskeleton proteins [BR:
shr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
111719477 (TNNC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_5
EF-hand_9
AIF-1
EH
SPARC_Ca_bdg
DUF5580_M
FCaBP_EF-hand
EF-hand_10
EF_EFCAB10_C
DUF6694
EFhand_Ca_insen
Motif
Other DBs
NCBI-GeneID:
111719477
NCBI-ProteinID:
XP_031813832
UniProt:
G3W5M3
LinkDB
All DBs
Position
1:80278157..80301741
Genome browser
AA seq
161 aa
AA seq
DB search
MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNGDGYIDLEELKTM
LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggatgacatctataaagcagcggtggagcaactgactgaagagcagaaaaatgagttc
aaggctgcctttgacatcttcgttctgggcgctgaggatggctgcatcagcaccaaggag
ctgggcaaggtgatgcgaatgctgggccagaaccccactcccgaggagctgcaggagatg
atcgacgaggtggatgaggatggcagcggtacagtggattttgacgagttcctggtcatg
atggttcgatgtatgaaggacgacagcaaagggaagtctgaggaggagttgtctgacctc
ttccgaatgttcgacaagaatggcgacggttacattgacttggaggagctgaagacgatg
cttcaggccacaggggagaccatcacggaggatgacatcgaggaactcatgaaggacggg
gacaagaacaacgatggccggatcgactatgatgagttcttggagttcatgaagggcgtg
gaatag
DBGET
integrated database retrieval system
