Sarcophilus harrisii (Tasmanian devil): 111719909
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Entry
111719909 CDS
T02286
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X3
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr00310
Lysine degradation
shr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
111719909 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
111719909 (PRDM2)
03036 Chromosome and associated proteins [BR:
shr03036
]
111719909 (PRDM2)
Enzymes [BR:
shr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
111719909 (PRDM2)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
111719909 (PRDM2)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
111719909 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
zf-H2C2_2
zf-C2H2_11
PyrI_C
Motif
Other DBs
NCBI-GeneID:
111719909
NCBI-ProteinID:
XP_012401099
LinkDB
All DBs
Position
3:complement(570248333..570438085)
Genome browser
AA seq
1495 aa
AA seq
DB search
MRDSEEGPKEEEEKPSASAVLSLEQTAVIQEMVNQDVLPKLIIPPPVSEPQTLSEGTPEV
VHCGSDDLEEEEEEDEEEEEDEEGEEDTNIPNESSEREPEVECEEKQTSEEPRNTTEENL
DGSLEVMPAVKIPKTKGDSNGDVFETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFK
CRYCGKAFGTQINRRRHERRHEAGPKRKPISTLQQPDDLVDGPVFGDDISLKDESNASNF
LQDRMILDSERVSQEIAVSSVVEENGDLKELHPCKYCKKVFGTHTNMRRHQRRVHERHLI
PKGVRRKGFLLEEPQLPAEQTQPTQNVYIASTELEEEGESDDVYIMDISSNISENLNYYI
DGKIQSNNSTSNCDVIEMEPSTADLYGLNCLLTPVTVEITQSVKTSQVHVAEDLPKDSSS
STNNDSKKRRTTSPPFLPKIKAETDSEPITPSCSLNLPLSGSTAETVSYHKEKNVFLSSK
LKQLLQTQDSNKLTAVISTTDIPKLSSSVSSSSSMLPVSSSRFKRRTSSPPSSPQHSPAL
RDFGKQSEGKAVWNDPAVSSKIPKLESHSSSPAWSLSGREESDTVSPSCFEDYKISKDWA
ASTTFGNVCNQQPLDLSSGVKQKSELTGKGQVPWESVLDLSVNKKSCGDMDIKEYKENNS
AQPTCSGIKKKKPTTCMLQKVLLNEYNGIDLAVEKAPDENRSPSPCKSLDPQPEPDLDPD
SSLPTPVAHSSPCNSPSPLPQTSVSSGQLPPLLIPTNPSSPPPCPPVLTVATPPPPLLPT
LPLPLPAPSSSVSPPSCPSPLSNTTTQSPLPILSPTVSPSASPVPSVEPLNSAASPGPPI
LSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSG
DNLEAPLPISFKQEDTENEDQKPSDDPQTSDEQDVVQETFNKNFICNVCESPFLSIKDLT
KHLTVHAEEWPFKCEFCVQLFRDKTGLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQ
RDLHPDRECTHHQFESGTLRPQNFTDPSKAKADHVHCLPEHPLEASKEEEEEEEVNDSSE
ELYTTIKIMASGVKSKDPDVRLGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQ
TFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVID
NSGKNAFRRMGQPKRLNFSVELSKMSSNKLKLSALKKKNQLVHKAILQKNKSAKQKADLK
NNDSDSHSHICPYCDREFTYIGSLNKHAAYSCPKKPISPSTKRSVSHSSKKGGISSPSNS
EKSNNQRRRTADAEIKMQSMQTHLGKTRARSSGPTTNPSPSPSFRAKQKVKFVPSVKSKK
SSSTSLRNSSPVRMAKMSHMEGKKSKAVAKNHSAHLSSKTSRNLHVRVQKSKAVLPSKPA
LASKKKSDRFSVKSRERSGGPITRSLQLAASADLTESKKEESSTKQEPKDFRNLL
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgagggattctgaagaaggacctaaagaggaagaagagaagccttcagcttcagcagtg
ctctccctagaacagacagctgtcattcaggagatggtaaatcaggatgtacttcccaaa
ttaataatccctcctcctgtctctgagcctcaaacactgtcagaagggacacctgaagta
gtacattgtggatcagatgacttggaggaggaagaagaggaggatgaagaagaggaagaa
gatgaggaaggggaagaagatactaatataccaaatgaaagttctgagagagagccagaa
gtagaatgtgaagaaaaacaaacatcagaagaaccaagaaatacaactgaagaaaattta
gatggctctcttgaagtaatgccagctgttaaaattcctaaaacaaagggagattccaac
ggtgatgtatttgaaacattcatgtttccttgtcaacattgtgaaaggaagtttacaacc
aaacaaggactggaacgtcacatgcatatccacatatctactgtcaatcatgctttcaaa
tgcaggtactgtggaaaagcttttggtacccagattaacaggagaaggcatgagagacgg
catgaagcagggccaaaaaggaaaccaatctcaactcttcaacagcctgatgaccttgta
gatggcccagtgtttggagatgatataagtcttaaagatgaatcaaatgcttccaatttt
ttgcaagatcgcatgattttggattcagagagagtttcccaagaaattgccgtttcttct
gttgtggaagagaatggagacctcaaagaacttcatccatgcaaatactgtaaaaaggtg
tttggaacacatacaaacatgaggaggcatcagcgtagggttcatgaacgtcatctgatt
cctaaaggagtaaggagaaaaggattcttacttgaagagccacaacttccagcagagcag
actcaaccgacccagaatgtatatatagcaagcacagagctagaagaagaaggagaatca
gatgatgtctatattatggatatttccagcaatatctctgagaatttaaattattatatt
gatgggaagattcagtctaataacagtactagtaattgtgatgtgattgaaatggaacct
agtactgcagatttgtatggcctaaattgtttgcttactcccgttacagtggaaattact
cagagtgtaaagacttctcaagtgcatgtagcagaggatcttcccaaggactcttctagt
agcacaaataatgattcaaagaagcgaagaaccaccagtccaccttttttacctaaaatt
aaggcagaaactgattcagaacctataacaccatcctgttccttaaacttacctctcagt
ggatccactgcagagactgtttcttatcacaaagagaaaaatgtctttttgtcttcaaag
ctcaaacagcttcttcaaacacaagatagcaacaagctaacagcagttatatctacaaca
gacatccctaaattaagttcatctgtctcatcatcttcttctatgttgcctgtgtcatcg
agtaggtttaagcgaagaactagctctcctccaagttctccacagcatagtcctgctctt
cgagattttggaaaacagagtgagggcaaagcagtatggaatgatccagccgttagttct
aaaatacccaaattggaaagtcatagcagttcccctgcctggagtttgtctgggcgggaa
gagagtgacactgtgagcccttcctgctttgaggattacaaaatatccaaagactgggca
gccagcaccacttttggtaatgtgtgcaatcagcaacctctggatttatctagtggtgta
aagcagaagtctgagcttacaggaaagggccaggtcccttgggaatctgtattggatctt
agtgttaataagaaatcctgtggtgacatggatatcaaggaatacaaagagaacaattca
gcacagcctacttgcagtggtataaagaagaagaaaccaacaacctgcatgttacagaaa
gttcttctcaatgaatacaatggcatagatttagctgtggaaaaggctccagatgaaaat
aggagcccgagtccatgtaaatcattagatccccagccagaaccagatcttgacccagat
tctagtttacccaccccagttgctcattcttctccttgcaattctccatcacccctccca
cagacttctgtgtcttctggtcagctgcctcctctcctaatccctacaaatccatcttct
cctccaccctgcccacctgtattaactgtggctacacctccgccacctctccttcctact
cttcctttaccacttccagctccatcttccagtgtttctcctccttcatgtccttcacca
ctttctaatactactacacaatcaccacttcccattctttcacctacagtgtctccatca
gcatctcctgttccatctgttgagcctctgaactctgcagcttcacctgggccacctata
ctttcttcttcctcctcttcttcctcatcctcttcttcttcctcctcctcctcttcttcg
tcctcctcctcttcctcctcttcttcctcttcatcctcttcttcattctcatcttcatct
tcttcttcttccccatcaccaccacccctctcagtggtttcatctgttgtttcatctggt
gataacttggaagctcctctccctatatctttcaaacaagaagacacagagaatgaagat
cagaaaccaagtgacgatccacagacatcagatgaacaggatgttgttcaagaaacattc
aataaaaactttatttgtaatgtttgtgaatcaccttttctttctattaaagacctaacc
aaacatttaactgttcatgctgaagaatggcccttcaaatgtgaattctgtgtgcaactg
tttagggacaaaacgggcttgtcagaacatcgttttttgcttcatggagttgggaatata
tttgtatgttcagtatgtaaaaaagaatttgcctttttgtgcaatttacagcagcatcag
cgagatctccatccagatagagaatgcacacaccatcagtttgaaagtggcaccctcagg
ccccagaattttacagatccctccaaggctaaagcagaccatgttcattgtttaccagag
catcctttagaagcttctaaagaggaggaggaagaagaagaggtcaatgattcttcagaa
gaactttatactaccataaaaataatggcttctggagttaagtcaaaagatccagatgtt
cgattaggcctcaatcagcactacccaagttttaaaccacccccatttcagtatcaccac
cgaaatcctatgggcattggagttacagccacaaatttcaccactcacaatatcccacag
acctttactactgccattcgctgcaccaaatgtgggaaaggtgttgacaacatgcctgaa
ttacacaaacatatcttggcatgtgcttcagctagtgacaaaaaaaggtacacacccaag
aaaaatccagtaccactgaaacagactgtacaacccaaaaatggtgtcgtggttatagat
aactctgggaaaaatgcctttagacgtatgggacaacccaaaagactaaattttagtgtt
gaactcagcaaaatgtcatctaacaagctcaaactaagtgcactgaagaagaaaaatcaa
ttagtacataaagcaattctgcaaaaaaataaatctgccaagcaaaaagcagacttaaaa
aataacgattcagattctcactcacacatttgcccttactgtgatcgtgagttcacttac
attggaagcctaaataaacatgcagcttacagctgtcctaaaaagccaatttccccttcc
accaagagaagtgtttctcattcgtccaagaaaggtggtatctcatcaccttcaaacagt
gagaaaagtaataaccaacgaagacggacagctgatgctgagattaaaatgcagagcatg
cagacccacttgggcaagacaagagcacgaagctcaggacccaccacaaatccatcaccc
tctccatcttttagagcgaaacagaaggtgaagtttgtaccttcagtgaaatccaaaaaa
tcaagctctacttctctaagaaactccagtcctgtaagaatggccaaaatgtctcatatg
gaggggaagaagtcaaaagcagtagccaagaatcattctgctcatctctccagcaaaaca
tcccggaatctgcatgtgagggtacagaaaagcaaagctgttttgccaagcaagcctgct
ttagcgagcaagaaaaaatcagacagatttagtgtcaaatctagagaaaggagtggaggg
cccatcactcgaagcttgcagctggcagcctctgcagacctcactgaaagcaaaaaggaa
gagagcagtacaaagcaggagcccaaggacttcaggaacctcctgtaa
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integrated database retrieval system
