Sarcophilus harrisii (Tasmanian devil): 111720469
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Entry
111720469 CDS
T02286
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03440
Homologous recombination
shr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111720469 (BRIP1)
03460 Fanconi anemia pathway
111720469 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shr03400
]
111720469 (BRIP1)
Enzymes [BR:
shr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111720469 (BRIP1)
DNA repair and recombination proteins [BR:
shr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111720469 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
111720469 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
DUF2226
Motif
Other DBs
NCBI-GeneID:
111720469
NCBI-ProteinID:
XP_031822380
LinkDB
All DBs
Position
4:351635755..352014652
Genome browser
AA seq
1467 aa
AA seq
DB search
MSSTQSEYIIGGVKIHFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSEKPGEENLNKKTEVPLPCYCTCHLHNPTNDISVNVNQGASCSFTSPIMASSM
KNETSACQEDSTPKITLAAKLSAKKQASLLSDEKDDFQVDKKRIRPLETKQQVRKRSCFA
KDIWDLDTKVVPERIVKPNSPVGKKITFSPQKILGPCTRCSCSTKSEKSKDDDNITKKEH
GGICKTPKIFFGTRTHKQIAQITRELRRTAYSGVRMTILSSRDHTCVHPEVIGNFNRNEK
CMELMDGKNGKSCYFNHGVHKISEQHVLQTLLGMHRAWDIEDLVGLGKKLKACPYYAARE
LMQDADIVFCPYNYLLDSQIRESMDINLKEQIIILDEAHNIEECARESASYSVTEVQLRF
ARDELDIMVSNNIRKKNHEPLRAVCYSLINWLQENAEHLEERDYESSYKVWSGNEMISHF
YKMGITAATFSVLQGHFTAVLQKEEKITSHNGKEQVREIPIVSPSTQIMLKGLFMVLDYL
FRQNSRFADDYKVAIQQTYSWTSQNDIPDKNGFFVLPKNKKRSRQKMAVNVLNFWCLNPA
VAFSDITCNIRTIVLTSGTLSPMKSFSSELGVTFAIQLEANHVIQNSQVWVGTIGSGPKG
RNLCATFQHTETFAFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKERWIHTGLWHNL
ELVKTVITEPQRGEKVIFDEVLQVYYDAIKCKGDRDGALLIAVCRGKVSEGLDFSDENAR
AVITIGIPFPKVNDLQVELKRKYNDQHSKRGLLPGRQWYEIQAYRALNQALGRCIRHKND
WGALILVDDRFRSNPDRYISGLSKWVRQQIKHHSTFESALESLAAFSKKHQKIIDVSSSD
NNESVQEVASLKDESSTSLLESTVHLSPNVLQKDERKPFVQELQAPRTMAVEFKLHSHLC
NIITAQNKNDSLFLEDSPQKIKRENFLISRSTSPTFNKQTERNSCPESNSGKKYFSPKSL
TSTPLHRFPKNDDFSTFPSKKEKRESTVELSLTNRGQSSSLSGPQSETITSLLKRTNADS
KKYPAEQFLCPEEALDKDIDLSPIHGEAGFSKVNEDIESKEEDESIFFTPELYDDAESNA
EENEELLENGGINQRTENSNYVIAENLLEIDCTKGMGSDYTDMWLIRNMQNEEYKVDNLS
NNVKVANICEQELQRTQEMDPIGLKVFRARRQRTWKAVHWRKGFIHGTNEGRKDKSNQLC
KSGLCCIACGAELLPTVKGILKKAFSRNAELIKIQKLFFNVEVSVIESVCQCSNELGGRK
EEENMLYVISDSAALSHLKNTLTVFQTTVKNEGKETGLSLNAIWNMKECSLTSYLQCRNC
INQSLFPCPLIGAEIIDPRYSAEPRVWLLPSAVHCCLWFPKSLVFTKTRKFQGNTLQSHQ
GPCELVEEMGQRQDSGRSSLGEPCFSA
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctacacaatctgaatacattattggtggagtgaagattcacttcccttgtaaa
gcttatccatcacagcttgctatgatgaattctattgttagaggattgaacagtaaacaa
cattgtttgttggagagccccacaggaagtgggaaaagcttggccttactttgttctgct
ttggcatggcagcaatctctcagtgaaaagccaggagaggagaacttgaataaaaagact
gaagtacccttgccatgttattgtacatgtcatttgcacaaccccactaatgatatcagt
gttaatgtgaaccaaggagcttcatgttctttcaccagtccaatcatggcatcttccatg
aaaaatgaaacctcagcttgccaagaagattctactccaaaaatcacgctagctgcaaaa
ttatctgccaagaaacaggcatctttgcttagtgatgaaaaggatgattttcaagtagac
aagaaaaggattcgtcccttagaaaccaagcagcaggttagaaagcgttcttgctttgca
aaggatatatgggatttagatacaaaagttgtaccagaaaggattgtgaagccaaattct
cccgtgggaaaaaagataaccttttctccacaaaagattcttggtccttgtactcgctgt
tcctgttccactaaaagtgagaaaagtaaagatgatgataatataacgaagaaagaacat
gggggaatatgcaagacacctaaaatattttttgggactcgtacacataaacagatagct
cagattactagagaactgcggaggacagcatattctggggtccgaatgactattctttct
agcagggatcatacttgtgtccatcctgaagtaatcggtaatttcaacaggaatgaaaaa
tgtatggagctgatggatggaaaaaatggtaaatcctgttatttcaatcacggtgtccat
aaaattagtgaacaacatgttctacagactttactagggatgcacagggcctgggatata
gaagatcttgtgggcctgggaaaaaagctaaaggcctgtccatattatgcagctagagaa
ctaatgcaagatgctgacattgtgttctgtccctacaactatctcctagattcacaaata
agggaaagtatggatatcaatctgaaagagcagatcatcattttagatgaagcccataat
attgaggaatgcgcacgtgagtcagccagttacagtgttacagaagtccaacttaggttt
gcccgagatgaattagatatcatggtcagcaataatataaggaagaaaaatcatgaaccc
cttcgagctgtgtgctatagcctcataaattggttacaggaaaatgctgaacatcttgaa
gaaagagattatgaatcatcctataaagtgtggagtggaaacgaaatgatctctcacttc
tacaaaatgggcataactgctgctaccttttcagtattacagggtcattttactgctgtg
cttcaaaaagaagaaaaaatcacatcacataatggtaaagagcaagtcagagaaatacct
attgttagtccttcgactcagattatgctcaaaggactttttatggtactggactatctt
tttaggcagaatagcaggtttgcagatgattacaaagttgctatacagcaaacttactct
tggacaagccagaatgatattccagataaaaatggtttctttgttttacctaaaaataag
aaacgttctaggcaaaaaatggcagtcaatgtgctaaatttttggtgcttgaatccagct
gtggccttttctgatattacatgtaatatacgcacaattgttctgacatctggtactctg
tcaccaatgaaatctttttcatctgaacttggtgtgacatttgctatccaactagaggct
aatcatgtcattcagaactcacaggtttgggttggcactattgggtcaggtcccaaaggg
cggaatctctgtgccaccttccagcacacagagacctttgcattccaagatgaagttgga
gcgcttcttttgtctgtgtgccaaacagtgggccaaggaattttgtgcttcttgccatct
tacaagttactggacaaattaaaagaacgttggatacatactggtttatggcataacctt
gagctagtgaaaacagtcattacggaaccacaaaggggagagaaagttatatttgatgaa
gtgttacaagtgtactatgatgcgatcaagtgtaaaggagaccgagatggtgccctcctt
atagcagtttgccgaggtaaagtgagtgagggactggatttctcagatgagaatgctcgt
gctgtcataactatagggatcccatttccaaaagtgaacgatcttcaggttgaattaaag
agaaaatacaatgaccaacattcaaaacgaggtcttttacccggccgccagtggtatgaa
attcaagcttatagagccctgaaccaggcacttggcaggtgtattcggcacaaaaatgat
tggggagctcttattttagttgatgatcgcttcagaagcaacccagatcgatatatatct
ggtctttccaaatgggttcgtcaacagattaagcaccattcaacctttgaaagtgcactg
gagtccttggctgcattttctaaaaagcatcaaaaaatcattgatgtgtcatcttcagat
aataatgaatctgtgcaagaagtagcatctttaaaggatgagtcctcgacatctttatta
gaatcaacagttcacctatcaccaaatgttcttcaaaaagatgaaaggaagccttttgtc
caggaacttcaggctcctagaacgatggcggtggaattcaaactacatagtcacctgtgt
aacatcatcacagcccagaataaaaatgattcattatttttggaagattctccccagaaa
ataaagagggaaaattttttaatatccagatccacaagtccaacctttaataaacaaaca
gaaaggaatagctgtcctgaatctaactctgggaagaaatattttagccccaagtcactg
acttccacacctctgcacagatttccaaagaatgatgacttcagtactttcccttccaaa
aaggaaaagagggaaagtacagttgaactgtctctcaccaatagaggccagtcctcttcc
ttgtcaggcccacaatcagaaacaatcacttcattgttaaaaaggactaatgctgatagt
aaaaaatatcctgctgaacagtttctctgccctgaagaagctctggataaagacattgat
ctgagtcctatacatggagaagctggattttccaaagtaaatgaagatattgaatcaaaa
gaagaggatgaatctatctttttcacaccagaactttatgatgatgcagaatccaatgca
gaagaaaatgaagagctacttgaaaatggtggaataaatcaaaggactgagaattcaaat
tacgttatagcagaaaatcttttggaaattgattgcaccaaaggaatgggttcagattac
acagacatgtggttgattagaaacatgcaaaatgaagaatataaagttgacaaccttagt
aataatgtaaaggtggcaaatatatgtgaacaagagctgcaaaggactcaggaaatggac
cctataggactgaaagtatttagagcacgcagacaaaggacttggaaagctgtccattgg
agaaagggcttcattcatggaactaatgaaggaaggaaggacaaaagtaaccagctttgc
aagtcaggactttgctgtattgcttgtggagcagaattattacccacagtgaaaggaatt
ctaaaaaaagctttttccagaaatgctgaactgataaaaatccagaaactcttcttcaat
gttgaagtcagtgtcatagaatccgtttgtcagtgctcaaatgaattaggtggcaggaag
gaagaagaaaatatgctctatgtcatcagtgatagtgctgctcttagccatttaaaaaat
accttaacagtttttcagactacagtgaagaatgaaggaaaggagacaggtttatcttta
aatgccatctggaatatgaaggaatgttctttaaccagctacttacagtgtagaaactgt
atcaaccagtctcttttcccatgtcctttaataggggctgaaataattgaccctagatac
agtgctgaacccagggtctggctgctgccctcagcagtgcattgctgcctgtggttcccc
aaatctctcgtcttcaccaagactaggaagttccagggaaacactcttcaaagtcatcag
gggccttgtgagctggtggaagaaatgggtcagagacaggattctggaagatcatccctg
ggagaaccatgtttttctgcatga
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integrated database retrieval system
