Sarcophilus harrisii (Tasmanian devil): 111721616
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Entry
111721616 CDS
T02286
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
111721616 (PCDH19)
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
111721616 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
111721616
NCBI-ProteinID:
XP_031801021
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All DBs
Position
X:complement(71909847..72020647)
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AA seq
1143 aa
AA seq
DB search
MDSFFPMLLLEALLWTQAASLINLKYSVEEEQRAGTVIANVAKDAREAGFLLDARQPAFR
VVSNSAPHLVDINPNSGLLVTKQKIDRDLLCHQSPKCVISLEVMSSSMEICVVKVEIKDL
NDNTPSFPSSQIELEISETASPGTRIPLDGAYDPDSGSFGVQTYEITPNDLFGLEVKTRG
DGSRFAELVVEKNLDRETQARYNYRITALDGGDPPRMGTVGLAIKVIDSNDNNPVFPEPT
YSVSVPENAPLNTPVLRLNASDPDEGTNGEVVYSFYGFVNEKARGLFQIDPHSGLISVSG
AIDYEQGRVYELDVQAKDLGPNSIPAHCKVTVNVLDVNDNAPVINLLSVNSELVEVSESA
PPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQARDGGVPSLQSTKSFTVKITDENDNHPHFSKAYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
VTYDMTEGDRGFFVIDQANGEIRTTRTFGDGSKTTYELIVVAHDHGKTSLSASALVLIYL
SPALDAQESVGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSSCLAIP
RLFCHFIKRPKRQVEGLRLCFSWEQGGRHKSRGETEPAGTRIAEYSYGHQKKSSKKKKIN
KNDIRLVPRDVEENDKMNVVSCSSLTSSLNYFDYHQQSLPLGCRRSESTFLNVESQAGRG
AGSGPVYHHTFAVQSAQQPDLIINGVPLPETENYSFDANYVNNRAHIIKSSSTFKDLEGN
SLKDSGHEESDQTDSEHDIQRGLYCDTAVNDVLHSSVASMGAQLPDHDQNEGFHCREECR
ILGHSDRCWMPRNPLPTRAKSPDRGRNIITLSIEATAADVEVYEDCTTKRTFATFGKDGG
DHAEERSAQKGKRAVDLAICSPKVAGAIREAGNGCEAISPVTSPLHLKSSLPAKPTMVTY
SAIIHCPATHAVEPFPNNGPSRPTEAEPRGADSEKVVREVNPLLQESPEKESPGAKRLKD
IVL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggattcttttttccccatgctcctcctcgaggctttgctgtggacccaggcggcatcg
ctgatcaatttaaaatactcggtcgaggaggagcagagagcggggacggtgatcgccaat
gtggctaaagacgcccgggaagccggcttcctgctggacgcccggcagcccgccttccgg
gtggtctccaactcggccccccacctggtggacatcaaccccaactccgggctgctggtc
accaaacagaaaatcgaccgggacctgctctgccaccagagccccaagtgcgtgatctcc
ctggaggtgatgtccagctccatggagatctgcgtggtcaaggtggagatcaaggacctg
aacgacaacacgcccagcttccccagctcgcagatcgagctggagatctcggagacggcg
agccccggcacgcgcatcccgctggacggcgcctacgacccggactcgggcagcttcggc
gtgcagacctacgagatcacgcccaacgacctgttcggcctggaggtgaagacgcgcggc
gacggctcccgcttcgccgagctggtggtggagaagaacctggaccgcgagacccaggcc
cgctacaactaccgcatcacggccctggacgggggcgacccgccgcgcatgggcaccgtg
gggctggccatcaaggtgatcgactccaacgacaacaaccccgtgttccccgagcccacc
tactcggtgagcgtccccgagaacgcgcccctcaacacgcccgtcctccgcctcaacgcc
tccgacccggacgagggcaccaacggcgaggtggtctactccttctacggcttcgtcaac
gagaaggcccgcggcctcttccagatcgacccgcacagcggcctgatctcggtgagcggc
gccatcgactacgagcagggccgcgtctacgagctggacgtgcaggccaaggacctgggc
cccaactccatcccggcccactgcaaggtcaccgtgaacgtgctggacgtcaacgacaac
gcgcccgtcatcaacctgctgtcggtcaacagcgagctggtggaggtgagcgagagcgcc
ccgccgggctacgtgatcgcgctggtgcgggtgtccgaccgcgactcggggctcaacggg
cgcgtgcagtgccgcctcctgggcaacgtgcccttccgcctccaggagtacgagagcttc
tccaccatcctggtggacgggcggctggaccgcgagcagcgggaccagtacaacctgacg
atccaggcccgcgacgggggcgtgccctccctgcagagcaccaagtcgttcaccgtcaag
atcacggacgagaacgacaaccacccccacttctccaaggcctactaccaggtcatcgtg
caggagaacaacaccccgggggcctatctgctctccgtctcggcccgggaccccgacctg
ggcctcaacggcagcgtctcctaccagatcgtgccctcgcaggtgcgagacatgcccgtc
ttcacctacgtgtccatcaaccccaactcgggggacatctacgcgctgcgctccttcaac
cacgagcagaccaaggccttcgagttcaaggtgctggccaaggacgggggcaacccctcg
ctgcagagcaacgccacggtccgggtcatcgtcctcgacgtgaacgacaacaccccggtg
atcacggcgccgcccctggtcaacggcacggccgaggtctacatcccccgcaacgccggc
gtgggctacctggtcaccgtggtcaaggccgacgactacgacgagggcgagaacggcagg
gtcacctacgacatgaccgaaggggaccggggcttcttcgtcatcgaccaggccaacggc
gagatccgcaccacccggaccttcggggacggctccaagaccacctacgagctcatcgtg
gtcgcccacgaccacggcaagacgtccctctcggcgtccgccttggtcctcatctacctg
tccccggccctcgacgcccaggagtcggtgggctcggtcaacctctccctgattttcatc
atcgccctgggatccatcgccgccatcctcttcgtcaccatgatcttcgtggcggtgaag
tgtaagagggacaacaaggagatccggacctacaactgcagcagctgcctagccatccct
cgcctcttctgccatttcataaaaaggcccaaacggcaagtggaggggctgcggctctgt
ttctcctgggagcagggaggaaggcacaaaagcaggggagaaacggagcccgccgggacc
aggatcgccgagtactcctacgggcaccagaagaaatcgagcaagaagaagaagatcaac
aagaacgacatccggctggtgccccgggacgtggaggagaacgacaagatgaacgtggtc
agctgctcctccctgacctcgtccctcaactacttcgactaccaccagcagagcctgccg
ctgggctgccgccgctccgagagcaccttcctgaacgtggagagccaggccggccgcggc
gccggctccggccccgtctaccaccacaccttcgcggtgcagagcgcccagcagcccgac
ctcatcatcaacggcgtgcccctgcccgagaccgagaactactccttcgatgccaactat
gtgaacaaccgggctcacataattaagagcagctccaccttcaaggacttggaggggaac
agcctgaaggacagcgggcatgaggagagcgaccagacggacagcgagcatgacatccag
cggggcctgtactgcgacacggccgtcaatgatgtcctgcactccagcgtggcctccatg
ggcgctcaactgcctgaccacgatcaaaacgaaggctttcattgcagggaagaatgccgc
atcctcggtcactctgacaggtgctggatgccccggaacccccttcccactcgggccaag
tccccggatcgtggaagaaacatcatcaccctgtctatcgaagccaccgctgccgacgtc
gaggtctacgaagactgcacgaccaagaggactttcgcgacctttggcaaggatgggggc
gaccacgccgaggagcgttcggcccagaaaggcaagagggcggtggacctggccatctgc
agccccaaggtcgccggcgccatccgcgaggcgggcaatggttgcgaagctatcagccct
gtcacttcgcccctccacctgaagagttctctgcccgccaagccgactatggtcacctac
agcgccatcatacactgcccggccacccacgccgtggagccgttccccaacaatgggcct
tctcgtcccaccgaagcggagccacgtggagccgacagcgagaaagtggtgcgtgaggtc
aaccctctgctgcaggagagtccggagaaagagtctccgggagcgaagaggctgaaggat
atcgtgctgtaa
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integrated database retrieval system
