Sarcophilus harrisii (Tasmanian devil): 116419010
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Entry
116419010 CDS
T02286
Symbol
NYX
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shr00535
]
116419010 (NYX)
Proteoglycans [BR:
shr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
116419010 (NYX)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
DHU1_N
LRR_LRWD1
LRR_6
Motif
Other DBs
NCBI-GeneID:
116419010
NCBI-ProteinID:
XP_031815262
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Position
3:complement(250918367..250924518)
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AA seq
501 aa
AA seq
DB search
MTHLFFPPLLAFSCLMEPLFFACFLPFLPNRCCCCEVILCFPCAHAVWACVRTCPTGCTC
TQERSCSVLCDRTGLLQIPSEFPCEASFINLDKNGIKFLAERAFGTLPSLRHLSLSHNNI
SFITPGAFKGLPNLVELRIAYNEDIRYLHTKTFAFLRRLVRLDVAGCNLFSIPDRIFVDL
PALQELSCFQNHFRRVPWAVRGMQNLTHLYLERNWIEAIAYNSLQGLGRLHSLSLQDNRI
SVVHAGAFQDCQRMEYLYLNDNLLHSLPGSSFKGLSHLKMLNLGGNSLSQVSRDWFQDLV
ELEVLYLDRNRIQSIEEGAFENLTSLMALHLNSNNLTSLPFSVFQPVYFLGRLYLFRNPW
HCDCQLEWLKEWMESYGLVRDVTCASPSSVASGDLSLVDFGRSQEGLCLDPEELNLTAPS
EAPSEGPPSATESRFSSLISKLLSPRAPPEDVANGTLGLANSSLLESLSSGLRGRPGSKA
LTFWALLHLFLCDIVTRLSVG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgactcatcttttttttcctccccttcttgccttctcttgcctcatggaacctctgttc
tttgcctgcttccttccctttctgcccaaccgctgctgctgctgcgaagtgattctctgc
ttcccctgtgcccacgctgtctgggcctgtgttcgcacctgtcccactggctgcacctgc
actcaggagcgcagctgctccgtgttgtgtgacaggacgggcctcctgcagatccccagt
gagttcccttgtgaggcttccttcatcaacctggacaagaacggcatcaaattcctggca
gagcgggcctttgggaccctgccctccctccgacacctgtccctgagtcacaacaacatt
tccttcatcactccaggggccttcaaggggctgcctaacctagtggagctcaggattgcc
tacaatgaggacatccgctacctgcacacaaagacttttgctttcctccgacgcctggtc
aggctggacgtggcaggctgcaacctgttcagcatccctgaccgaatctttgtggacctc
cctgccttgcaggagctttcctgcttccagaaccacttccgtcgggtgccctgggcagtc
agggggatgcagaacctgacccatctctacctggaacgaaactggatcgaagccattgcc
tacaattccctgcagggcctgggccggctgcactccctgagtctgcaagacaacaggatc
agtgtggtgcatgcaggtgcattccaggactgccagcggatggagtacctctacctgaac
gacaatctcctccacagtctcccagggagctccttcaagggcctgagccacctaaagatg
ctcaacctcgggggcaactccctgagccaagtgtccagggactggttccaggacctggtg
gagctggaagtgctctatctggacaggaacaggatacagtccatcgaggaaggggccttt
gagaacctcaccagcctcatggccctgcacctcaacagcaataacctcacctccttgccc
ttctccgtcttccagccggtctacttcctgggccgtctctacttgttccggaacccgtgg
cactgtgactgccagttggagtggctcaaggaatggatggagagttacgggctcgtccgg
gacgtcacttgtgcctctccatcctctgtggccagcggagacctgagcttggtggacttt
ggccggtcccaggaggggctctgcctggaccccgaggagctgaacctcacagcccccagc
gaggccccctcggaggggcctccctcagccacggagagcaggttcagcagcctcatctcc
aagctcctgtccccaagggctcctccagaggatgtggccaacggcaccttgggcttggcc
aacagctctctcctggagagcctttcctcaggcctgcgggggaggccgggaagcaaggcc
ttgacgttttgggccttgcttcacctatttctatgtgatatagtgacaagactgagcgtg
ggataa
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