Sarcophilus harrisii (Tasmanian devil): 116419660
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Entry
116419660 CDS
T02286
Symbol
HMGA2
Name
(RefSeq) high mobility group protein HMGI-C isoform X1
KO
K09283
high mobility group AT-hook protein 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr05202
Transcriptional misregulation in cancer
shr05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116419660 (HMGA2)
05206 MicroRNAs in cancer
116419660 (HMGA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
116419660 (HMGA2)
03036 Chromosome and associated proteins [BR:
shr03036
]
116419660 (HMGA2)
Transcription factors [BR:
shr03000
]
Eukaryotic type
Other transcription factors
HMGI(Y)
116419660 (HMGA2)
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
116419660 (HMGA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AT_hook
Motif
Other DBs
NCBI-GeneID:
116419660
NCBI-ProteinID:
XP_031796737
LinkDB
All DBs
Position
5:complement(73356394..73544969)
Genome browser
AA seq
141 aa
AA seq
DB search
MSARGEGAGQPSTSTQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSP
SKAAQKKAEATGEKRPRGRPRKWVSNKIPVLFSYLLTSQKKTLGIILCMLGNWQWEEIYN
SLYGFFLDLFFIMIFYLLSIV
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaagaggtgaaggagccggtcagccttccacttccacccagggacaacctgca
gccccggcgcctcagaaaagaggacgaggtcgacccaggaagcagcaacaagaaccaaca
ggtgagccttctcctaaaaggcccagaggaagacccaaaggaagcaaaaacaagagtcct
tcaaaagctgcccaaaagaaagcagaagccactggagaaaaacgaccaagaggccgaccc
aggaaatgggtaagtaataaaatcccagttctattttcttatcttttgacttctcagaaa
aaaactcttggtattatcttgtgtatgttgggcaattggcagtgggaggaaatatacaat
tctttatatggattttttttggatctcttttttattatgatattttatttattatcaatt
gtgtaa
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integrated database retrieval system
