Sarcophilus harrisii (Tasmanian devil): 116420153
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Entry
116420153 CDS
T02286
Symbol
PCDH10
Name
(RefSeq) protocadherin-10
KO
K16499
protocadherin delta 2
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
shr04515
]
116420153 (PCDH10)
Cell adhesion molecules [BR:
shr04515
]
Cadherins
Protocadherins
116420153 (PCDH10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116420153
NCBI-ProteinID:
XP_031799981
UniProt:
A0A7N4NTJ4
LinkDB
All DBs
Position
6:56662959..56721705
Genome browser
AA seq
1046 aa
AA seq
DB search
MIVLLFFALLWMVEGVLGQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTVPNSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFRVEIEVLDINDNPP
AFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGGGEGGGAGGAGGGGSPPQQQRTGTALLTIRVL
DSNDNVPSFDQPVYTVSLPENSPPGTLVIQLNATDPDEGPNGEVVYSFSSHISPRARELF
GLSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFS
TVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTETPL
DREAGDSYTLTVVARDRGEPALATSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGAY
IYAVSATDRDEGANAQLAYSILDCQIQGMSVFTYVSINSENGYLYALRSFDYEQLKDFSF
QVEARDAGSPLALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLLT
RVAAVDADDGENARLTYSIVRGNEMSLFRMDWRTGELRTARRVPAKRDLQRPYELVIEVR
DHGQPPLSSTATLQVQLVDGAVEPLGGGGGGGAGGGPGGEHQRPSRSGGGETSLDLTLIL
IIALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCCGGAGGGSSSCCSRQ
ARARKKKLSKSDIMLVQSSNVPSNPAQVPVEESGGFGSHHHNQNYCYQVCLTPESAKTDL
MFLKPCSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVDRPRR
VNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGQSSGMDLFSNCTEECKALGHSDRCW
MPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHSTLE
RKELDGLLSNTRAPYKPPYLTRKRIC
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattattttttgccttgctctggatggtggagggagtcctcggccagctg
cactacacggtgcaggaggagcaggagcatggcacgttcgtgggcaatatcgccgaagat
ctgggcttggacattacaaaactttcggctcgccgtttccagacggtccccaattcgagg
accccttacttggaccttaacctggagaccggggtgctgtacgtgaacgaaaagatagac
cgcgaacagatctgtaaacagagcccttcgtgcgtcctgcacctggaggtctttctggag
aacccgctggagctgtttcgggtggagatcgaagtgttggacattaatgacaacccgcca
gccttcccagaacccgacctgaccgtggagatctcagagagtgccacaccgggcacccgc
ttcccactggagagcgccttcgacccagacgtgggcaccaactccctgcgcgactacgag
atcacccccaacagctacttttctcttgacgtccagacccagggcgatggcaaccgtttc
gccgagctggtactggagaaaccgctggaccgggagcagcaggcggtgcaccgctacgtg
ctgaccgccgtggacgggggaggtggaggagaaggaggaggggcaggaggcgccggagga
gggggctcaccccctcagcaacagcgcacgggcacggccctgctcactatccgagtgctg
gactccaacgacaacgtgccctccttcgaccaacccgtttacaccgtgtccctgcctgaa
aactcgcccccgggtactctggtcattcagctgaacgccacggacccagatgagggcccg
aacggtgaggtggtgtactccttcagcagccacatctccccgagggcgcgggagctcttc
gggctgtcccctcgtaccggccgcctggaggtgagtggggagctggactatgaagagagt
cccgtctatcaggtgtatgtgcaagccaaggatttggggcccaacgccgtgccggcacac
tgcaaggtactcgtgcgggtgctggacgccaatgacaacgcgcccgagatcagcttcagc
acagtcaaggaagctgtgagtgagggcgcggcacccggcacggtggtcgccctgttcagt
gtgactgaccgcgattctgaggagaacgggcaggtgcagtgtgagctgctgggggacgtg
ccgttccgtctcaagtcctccttcaaaaactactacactatcgtgaccgagaccccgctg
gaccgggaggccggggactcgtacaccctgacagtggtggcgcgggatcgcggcgagccg
gcgctggccaccagcaagtccatccaggtgcaggtgtcggacgtgaacgacaacgctccg
cgcttcagccagcctgtctacgacgtgtatgtgaccgagaacaacgtgccgggcgcctac
atctacgccgtgagcgccaccgaccgagacgagggggccaacgcccagctcgcctattcc
atcctggactgtcagatccagggcatgagcgttttcacttacgtgtccatcaactcggag
aacggttacttgtacgcgctgcgctccttcgattacgagcagctcaaggacttcagcttt
caagtggaagcccgggacgcgggcagtcccctggccctggccggcaacgccaccgtcaac
atcctcatcgtggaccagaacgacaacgctcccgccatcgtggcgcccctgcccgggcgc
aacgggaccccggcgcgcgaggtgttgccgcgctccgcggagcctggctaccttctcacc
cgggtggcggcggtggacgcggacgacggagagaacgcccgcctcacctacagcatcgtg
cggggcaacgagatgagtttgttccgcatggactggcgcacgggggagctccgcaccgcg
cgcagggtcccggccaagcgcgacctccagcggccttacgagctggtgatagaggtgagg
gaccacgggcagcccccgctgtcgtccaccgcgacgctgcaggtgcagctggtcgacggg
gcggtggaacccttgggcggcggcggggggggcggagcaggagggggtcccggcggagag
caccagcgccccagccgctcgggcggcggggagacctcgctggatctcaccctcattctc
atcatcgccctggggtcagtgtcttttatcttcctgctggccatgatcgtgctggccgtg
cgctgccagaaggagaaaaagcttaacatatacacgtgcctggccagcgattgctgcctc
tgctgctgctgctgctgtgggggcgcgggcggcgggagttcctcctgctgcagccgtcag
gctcgggcgcgcaaaaagaagctcagcaagtcggacattatgttggttcagagctccaat
gtgcccagcaaccccgcgcaggtaccagtagaggagtccggaggcttcggctcccaccac
cacaaccagaactactgctatcaggtctgcctgactccggagtctgccaagaccgacctg
atgttcctcaaaccctgcagcccttcccggagcactgacactgagcacaacccctgcggg
gccatcgtcactggctacactgaccagcagcccgacatcatctccaacggcagcatactg
tccaacgagactaaacatcagcgagcagagctcagttatctagttgacagacctcggcgg
gtaaacagttctgcattccaggaagctgacatagtaagttctaaggacagtggacatgga
gacagtgagcaaggagacagcgaccatgacgccaccaaccggggtcagtcttctggaatg
gatctcttttccaactgtactgaggagtgtaaagctttgggccactcggatcgatgctgg
atgccttcctttgtgccctcagatggacgccaggcagcagattaccgcagcaatctgcat
gttcctgggatggactctgtgccagacactgaagtatttgaaactccagaagcccagcct
ggggcagagaggtcattctccacctttggtaaagagaaggcccttcacagcactctggag
aggaaggagctggatggactgctgtctaatacacgagcgccttacaaaccaccatatttg
acacggaaaaggatatgctag
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