Sarcophilus harrisii (Tasmanian devil): 116420250
Help
Entry
116420250 CDS
T02286
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 10-like
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shr04121
]
116420250
Ubiquitin system [BR:
shr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116420250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_Vps41
WD40_like
CtIP_N
Motif
Other DBs
NCBI-GeneID:
116420250
NCBI-ProteinID:
XP_031800462
LinkDB
All DBs
Position
X:34751052..34755850
Genome browser
AA seq
716 aa
AA seq
DB search
MVFTLSGPCPLHIIFSFPTGALRLQHGRKCLAAVERCGSGGSALQRWSAAARAEVPCSGG
ALRLGRKCLAAVERCGSGGSALPRGPQRLWWWLKGRPGSSGLAWLPATPSVMFPIRPSSP
VGVEEEELAEDDLAFISQSQGSSSEGSERSARSASSPPLLQPXQPSSSSSRQSHEPHNSQ
DPDRPFLTEATGPVTAEASAMTSSSGELVSQTNSEPSTRCPCSPSSQDSPTAQSTAAAVA
ACPSALTTFSRCVPATASGLGPPKPRWVGMTGRPVGIPLFRWLESRSLGRGNYVDPARDN
FHMMTRLYKSTHPTDSLYLNTRTHGAVFNLEYSPNGSVLIVACELSEVLLFDPISSKHIK
TLSEAHENCVNNIKFLDNRLFATCSDDCTVALWDLRKLNSKVCTLQGHSSWVKNVEYDVN
TRLLVSSGFDGNVIIWDTNRCTEDGCPHKTFFHTRFLMRMRLTPDCSKMLISTSSGYLLI
LHDLDLAKSLDVGSYPIMRAGSTAWSSHAATSATSSAPRAAGSSSHDGHSGSLFEQNVSR
SSQAEGVSPRNSFEILIPDVPFGRHRGNCITSLQLHPKGQAALLRCSSTIDDQEWTCVYA
FQDGPPVQPIAPHYSLRLTHYIEEANVSNGYIKELCFSPDGRLISSPHGYGIRLLGFDTQ
CSELFDCLPNRARPLQEIHSLYSHNDVVLTTKFSPTHCQIASGCLGGCVSLYQPKF
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcacgctttccggtccctgcccgctccacattatcttcagtttccccaccggg
gcgcttaggctgcagcacgggcggaagtgccttgcagcggtggagcgctgcggctcgggc
ggaagtgccttgcagcggtggagcgctgcggctcgggcggaagtgccttgcagcggtgga
gcgctgcggctcgggcggaagtgccttgcagcggtggagcgctgcggctcgggcggaagt
gccttgccgcgtggtcctcagaggctgtggtggtggctgaagggacggcccgggagctca
gggttggcctggttgccggcaacgccatcagtcatgttccccatcaggcccagcagcccc
gtcggggtcgaggaggaggaactagccgaggatgatctggcattcataagccaaagccag
gggagctcgtctgaggggagcgagaggtccgcccggtccgcctcttcccctcccttgctg
cagcccnggcaaccttcctccagctcttcccgccagtcccatgagccgcacaactcccaa
gatccagacaggccttttctgacagaggccacaggcccagtgacggcggaggcctcggcg
atgacgtcgagctctggggagcttgtgtcccagaccaacagtgagccgagcaccagatgc
ccttgctccccctcttcccaagactctcccactgcccagtccacggccgccgctgtggca
gcctgcccttctgccctcaccaccttctccaggtgtgttcctgccacggcctccggcttg
ggtcctccaaagcccaggtgggtgggaatgaccgggcgcccagtgggcatcccgcttttc
cgttggctagagagccgcagcctgggccgagggaattacgtagaccccgcccgagacaac
tttcacatgatgaccaggttgtacaaatccacccaccccacagactcactatacctgaac
acccgcacccatggcgccgtcttcaacttggagtactcccccaatgggtcagtgttaata
gttgcttgtgaactgagtgaagttcttctttttgaccccatatcttcaaagcatataaaa
acgctttctgaagctcatgaaaactgtgtaaataatatcaagtttctggataatagactg
tttgcaacatgctccgatgactgtacagtagccctttgggatctaagaaaattaaactct
aaagtgtgcactttacaaggtcattccagctgggtgaagaacgttgaatatgacgttaat
acaagactcttagtttcatcaggatttgatggaaatgtaatcatttgggacactaaccgg
tgcacagaagatgggtgcccacacaagacattctttcatacccgttttcttatgcggatg
aggttaactccagactgttccaaaatgctgatttcaacctcttctggttatcttttgatt
ttacatgatcttgacttggcaaaatctttagacgttggaagctatccaattatgagggca
gggagcactgcatggagttcccatgcggctacttctgcaacttcatctgctcctagagct
gctggttcatcttctcatgatgggcattctggttcattatttgagcaaaatgtgtcaaga
tcctctcaagcagaaggtgtgtcacctcgtaatagttttgaaattttaataccagatgtt
ccttttgggaggcatcgtggtaattgcattacatctttacaactacatcctaaaggtcag
gctgcccttttacggtgttccagtactatagatgaccaggagtggacctgtgtctatgca
ttccaagatgggcctccagtacaacccattgcacctcattattctctaagactgactcat
tatattgaggaagctaatgtaagcaatgggtacatcaaagaactttgtttcagccctgat
ggtcgactgatttcttccccacatggctatgggatccgcttattgggatttgacacccag
tgcagtgaactttttgactgcttacccaacagagccaggcccttgcaggaaatccattct
ctctactctcacaatgatgtggttctgacaaccaagttctcccccacacattgtcagatt
gcctcagggtgccttggtggatgcgtgtctttgtatcagccaaagttttag
DBGET
integrated database retrieval system
