Sarcophilus harrisii (Tasmanian devil): 116420403
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Entry
116420403 CDS
T02286
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Pathway
shr03083
Polycomb repressive complex
shr04980
Cobalamin transport and metabolism
shr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116420403
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
116420403
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116420403
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shr01009
]
116420403
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shr03036
]
116420403
03029 Mitochondrial biogenesis [BR:
shr03029
]
116420403
Protein phosphatases and associated proteins [BR:
shr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116420403
Chromosome and associated proteins [BR:
shr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
116420403
HMT complexes
COMPASS/SET1 complex
116420403
MLL-HCF complex
116420403
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116420403
Mitochondrial biogenesis [BR:
shr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
116420403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
116420403
NCBI-ProteinID:
XP_031801139
UniProt:
A0A7N4P6Z7
LinkDB
All DBs
Position
Y:77012..103993
Genome browser
AA seq
2030 aa
AA seq
DB search
MASVPSSLFLQPRWKRVVGWSGPVPRPRHGHRAVSIKELIVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKKLKV
KTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELCPGSGAV
AWDIPITYGVLPPPRESHTAIVYKEKEKKKSKLVIYGGMSGCRLGDLWILDIETLMWNKP
NLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMA
WETILMDMLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLETEKPS
APSRVHLVRANTNSLEVSWGSVPTADSYLLQLQKYDTPPAAAATSPIINPVPSMPANPPK
SPAPATIAPTIQPLTQMGITLFPQSSVTPPTTNPIQVLPTVPGSSISVSTMTRTQAGVLK
VTGPQLTTGNPVVTVRPSSQAGKAPLTVTSLPTGVRMVVPTPSSQAMVVGSSPQMSGMAA
LAAAAAATQKIPPSVPTVLSVPAGTTVVKTVAVSTGTTTLPATVKMASSPVMVSNPATRM
LKTAAAQVGTSVSSNNSTPTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLS
VPSGSALISNLGKVMSVVQTKPVQTSAVTGQASTNPVTQIIQTKGPLPAGTILKLVTSSD
GKPTTIITTTQASGTGTKPTILGISSVSPSTTKPGTTTIIKTIPVSAIITQSGATGVTSS
PGIKSPITIITTKVMTSGTGTPAKIITAVPKIATGHNQQGVTQVVLKGAPGQPGTILRTL
PMSGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGHNVSASLATP
ITTLGTIATLSSQVINPTTAITVSSAQTTVTTSGALTTPTITVQPVSQPTQVTLITPQGG
VETQPVHDLPVSILASPTTEQPTATVTIAEAGQGDMQSGTVTLVCSNPPCEIHETSTTNT
STTSMVANIGDFPQTTQVQLICDGQDISASEQQNANMSICSNQLCETPETSISSASMGIG
ANLTSSLTVDMGQILCINPHCETHETNTTNTTTTAISNINRQNVCSNPPCETHETGTTNT
ATTATSNIGTMQSASPSPQHEKHIQTDDLLVSVQSSISEELKGSCSLTRSSCQTHQSGST
CITLSMKSIEVSSATTIQICQKSSSKEIISNMTTSKGFYTQSIKAEQTSPPTVGNMSGLK
PLIWHSETQHIHKTSVPTMGQVSIDAKETIEIPTYPKPLCLLHQDLTKTTKTIGTQQCSS
LCENYETGIMSAMDNVDYNPACEIHKTNSTTTTSCLVISHNNSLQQTSLSNQETIISENQ
EPPYVPKTLTTVTDLVELPPKVTCTSKNRSPSGDTSGPKLCSNPPHETHETGTTHTATTV
TSNMGSNEVSPPATSGHEDLGNIQGTSVITTSFSSVTTATFDQSQALTTMTQSTLVPKPS
VPSLSLMIEAPPEEKTNIPAPDAVSSTVPSIEASLSVIHVLDSDEIKAKQMLREKIALSS
PLLQSSQYTGPSLKEQSQLPKNLVAVDNNAKEFPSDQDHTNSAAVTSIMVQHPPSQQPEV
FQHSLPHELMAEGQVDQTTLMVSGFSPEEFAVTTAADTAAHAIASEEAQTLAMHALQAAQ
QAIMGTSGQPMGTIVTQTELGYLPTIQEGQSTTIPLVLTQQELAVLVQQQHQDHVPTEAL
APADSLNDPTIESNDFKNPSSLTASNTFVTPPSVMVASTNKLQATTALTEKPELAHSTIR
ALIKKENQWFDVGVIKGTNMMVTHFLPSDDTSAMDYDSNIIPNYSQLKKQELLPGTAYKF
RVAGLNACGRGPFSEISAFKTCFPGFPGAPCAIKISKMPDGAHLTWEPPSMTSGKITEYS
VYLAIQSSQLGEQKIATPTQLAFLRVYCGSNPSCLVQSSSLSSAHIDCTTKAAIIFRIAA
RNEKGYGPATQVRWLQESNKDGSNVKPANKRLLSSSEMKSTLKKSKTDGQ
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggtgccttcatctctatttctgcaaccgcgttggaaacgtgtagtggggtgg
tctggacctgtaccccgacctcgtcacgggcatcgagctgtttcaattaaagaactgata
gtagttttcggtggtggtaacgaaggcattgtggatgaactgcatgtatataatacggct
actaatcaatggtttatccctgccgttcgaggagatattcctccaggatgtgcagcctat
ggttttgtatgtgatggaactcgccttctggtctttggtggcatggtagaatatggaaag
tatagcaatgatctatatgaactacaggcaagcagatgggaatggaagaagctcaaagtg
aagacacctaagaatgggcctcctccttgtccccggcttggacatagtttctctcttgtg
ggtaacaaatgttacctctttgggggtttggctaacgacagtgaagatcctaagaataac
attccaaggtacctgaatgatctctacatcctggagttatgcccaggttcgggtgcagtg
gcttgggatatccctattacctatggagtcttacccccaccccgtgaatcccacacagcc
attgtttataaagaaaaggaaaagaagaaatccaagctggttatttatgggggaatgagt
ggctgtagattgggtgacctttggatcctagatattgagactctgatgtggaataaaccc
aatcttagtggagtggctcctcttcctcgaagtcttcactctgctactaccataggaaac
aaaatgtatgtcttcggtggctgggtacctcttgtcatggatgatgtcaaagtagccaca
catgaaaaagagtggaagtgcactaatacactggcatgtcttaacctagatactatggcg
tgggagactatcctgatggatatgttggaagataatattccccgtgctcgggctggtcat
tgtgctgttgccattaatacccgactttacatatggagtggaagggatggctaccgaaaa
gcctggaataaccaggtttgctgtaaggacctctggtacttggagacagaaaaaccctca
gctccatctcgggtacatttggttcgagcaaatactaactccttagaggtgagctgggga
tcggtgccaacagctgacagctaccttctgcaacttcagaaatatgatactcctcctgca
gcagctgctacctcaccaataattaatccagttccttctatgccggccaaccctcctaaa
agtcctgccccagctaccatagctcctactatacagcccctcacccaaatgggcatcaca
cttttccctcaaagttctgtgactcccccaacaactaaccctattcaggttttgccaaca
gtacctggaagttctatttctgtgtccaccatgactaggactcaagcaggtgttcttaaa
gtaactggcccccaacttacaacaggaaacccagtagtcactgtccggccctccagccaa
gcaggaaaagcacctctcactgttacttcattgcctactggtgtacggatggttgtgcca
acaccaagttctcaagccatggtggtgggtagcagtcctcagatgagtggaatggcagct
ctggcagctgcagctgctgccactcagaagatccctccttctgttcctacagtattaagt
gttcctgcaggcactactgtggtaaaaactgtggcagtatcaactggaactactacttta
ccagctacagtgaaaatggcttcctcaccagtcatggtaagcaatccagctactcgaatg
cttaagacagcagcagcccaagtgggaacatctgtttcatcaaataatagcacacctact
cgacctattatcactgttcacaaatcaggcacagtaactgtggcccagcaagcccaagtg
gtgaccactgttgtgggaggagttaccaaaaccatcactttagttaagagtccactttct
gttccaagtggcagtgctctgatttctaatcttggcaaagttatgtcagttgttcaaacc
aaacctgtacagacctcagctgtaacaggccaggcttccactaatcctgtaacacagatc
atccagaccaagggacctttgccagcaggaaccattctgaagttagtaacatcatcagat
ggcaagcctaccactataatcacaaccacgcaggccagtgggacaggaaccaagccaacc
atcttaggtatcagcagtgtttctcctagtaccacaaaacctgggaccactaccatcatc
aagactattcctgtgtcagcaatcattacccagtctggagcaacaggtgtaaccagcagc
cctggaataaagtctcccatcactattatcaccacaaaagtcatgacttctggtacagga
acacctgccaaaattattacagctgtccctaaaattgctactggccataatcagcaagga
gtgacccaagttgtactgaagggagctccaggacaacctggcaccattcttcgaacactg
cccatgagtggagtgcgacttgtcacccctgtcacagtttcagcagttaagccaacagtc
accacattggtagtgaagggtaccactggtgttacaactttagggactgtaacaggcact
gtatctaccagccttgctggagctggtgggcataatgtcagtgcttctctggctactcct
atcaccacattgggcaccatcgctaccctctcaagccaagtgattaatcctactacagcc
attacagtttcatcagcacaaaccacagtaacaacatctggggctcttactacccccacc
attactgtgcagcctgtctctcagcccactcaagtgacattgattacaccacaaggaggt
gtggaaactcagccagtacacgatcttcctgtctccatcctggcttcacctactacagag
caacccactgctacagtaacaattgctgaagcaggtcaaggtgatatgcagtctggtact
gtgactttggtgtgttctaacccaccatgtgaaatccatgagacgagtaccaccaataca
tctaccacaagtatggtagccaacattggggactttccacaaaccacacaggttcaactc
atctgtgatggtcaggacatttcagcaagtgagcagcagaatgcaaatatgtcaatttgc
tccaatcaactttgtgaaactcctgagacaagtattagtagcgcttccatggggattggt
gctaacttaacaagctctctaactgtggacatgggacagattctgtgtataaaccctcat
tgtgagacccatgaaacaaacaccactaatacaaccaccacagccatttccaacattaat
agacaaaatgtctgctctaatcccccatgtgaaacccatgaaacaggaaccaccaataca
gctactacagccacatccaacataggtaccatgcagtcagcatctcccagccctcaacat
gaaaaacatatccagacagatgacttattagtttcagttcagtctagtattagtgaagag
ctcaaaggatcttgttctctcaccaggtcttcttgccaaactcatcagagtggctcaaca
tgcattaccctgagtatgaaatccatagaggtgtcttcagcaaccaccattcagatttgc
cagaagtcatcatctaaagagatcatctctaatatgactacttctaaggggttttatact
cagagtataaaagctgagcaaacaagtccacctactgtaggcaatatgtcaggtttgaag
ccactaatttggcattctgagacacagcatattcacaaaaccagtgtccccactatggga
caggtgagtatagatgccaaggaaaccattgaaataccaacataccctaagcctttgtgt
ctcctacaccaagacttgactaaaactacaaaaaccataggaacacaacagtgttcttct
ctttgtgagaattatgagactggtattatgtcagctatggacaatgttgactacaaccca
gcatgtgaaatccataaaacaaatagcactactacaacttcttgtttagtcattagtcat
aataatagtctgcagcaaacaagcctaagcaaccaagagacaatcattagtgagaaccaa
gagcctccctatgttcccaaaaccttgacaacagttacagatttggtagagttaccacca
aaggtcacatgtacttccaagaacagatccccttcaggagacacttctggaccaaaactg
tgttccaatcctccacatgaaactcatgagacaggtaccactcacacagccactactgtc
acctcaaacatgggctccaatgaagtttctccaccagctactagtggacatgaagatcta
gggaatattcaagggacttctgtgattaccaccagtttcagcagtgtgacaacagcaacc
tttgaccagtcccaggcactgaccactatgacacaatctactttggtccccaaaccttca
gttccaagtttatcattaatgatagaagcacctccagaggagaagactaacattcctgct
ccagatgcagtttccagtactgtgcctagcatagaggcgtctctttctgttatacatgtc
ttggattcagatgaaataaaagctaagcaaatgttaagagagaaaattgcgttatcatca
ccccttctgcagtccagtcagtacacagggccctctttgaaggaacagtcacagcttccc
aagaatttagtggctgtggacaataatgctaaggaattcccatcagatcaggaccatacc
aattcagctgctgtgacttctataatggtgcagcatcctccatctcaacaacctgaggta
tttcagcattctctgccccatgagttgatggctgagggacaggtggaccaaacaacattg
atggtttcagggttctccccagaagaatttgcagtcactacagcagctgatactgcagcc
catgcaatagctagtgaggaagcccaaactttggccatgcatgcgctacaagctgcacag
caagctataatgggtacttcagggcagcctatgggcacaatagtgacacagacagaactg
ggataccttcctaccatccaagagggtcaatctaccaccattcctcttgtattgacccag
caagaacttgctgtcttagtacaacagcagcatcaagaccatgttcctaccgaggccctg
gctcctgctgacagtctcaatgacccaaccattgagagcaatgattttaaaaatccatcc
agtctgacagcatctaatacatttgtcactcctccatctgtaatggtagccagcacaaac
aaactgcaggctacaactgctttgactgagaaacctgaactagcccactcaaccatcaga
gcactaataaagaaggaaaaccaatggtttgatgtgggcgtcatcaaaggcactaacatg
atggtaactcattttctgccatctgatgatacttctgccatggattatgattccaacatt
atccctaattatagccagttgaaaaagcaagagttgctgccaggcacagcctataaattt
agagtagcagggctcaatgcctgtggccgaggacccttcagtgagatctcagcattcaaa
acatgttttcctggtttccctggagccccttgtgcaattaaaatcagtaaaatgccagat
ggtgcccatcttacctgggaaccaccttcaatgacttcaggcaaaatcactgaatattct
gtataccttgccattcaaagctcccagttaggtgaacagaaaatcgcaaccccaactcaa
ctggcttttttgcgtgtctattgtgggtctaatccatcttgcttagtacagtcatctagt
ctttccagtgctcacattgactgtactaccaaggctgctatcatctttcgaattgctgcc
cgaaatgagaagggttatggccctgcgacacaagtcagatggctacaagaatctaataaa
gatggttctaatgtaaaacctgccaataagcgactgttatcctcatctgaaatgaaatca
actctaaagaaatctaagactgatggtcaataa
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