Sarcophilus harrisii (Tasmanian devil): 116422284
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Entry
116422284 CDS
T02286
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
shr
Sarcophilus harrisii (Tasmanian devil)
Brite
KEGG Orthology (KO) [BR:
shr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shr03000
]
116422284 (SOX1)
Transcription factors [BR:
shr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116422284 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116422284
NCBI-ProteinID:
XP_031814590
UniProt:
A0A7N4P0H1
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Position
3:164485101..164487616
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AA seq
394 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLTGQTGAGGGGGGGGGGGGGGGGSNKANQDRVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDY
KYRPRRKTKTLLKKDKYSLAGGLLTAGAGGGGPAVGVGMGVGVSPAGVGQRLESPGGTAS
GGYAHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGAGGAHHHPHAHPHHPHHPHN
PQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLSYGAAAAAAAAAGGPHQNSAVAAAAA
AAAASSGALGALGSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAASAA
AAAAAAAQSRLHSLPQHYQSASTGVNGTVPLTHI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggaaacggacttgcattccccgggtggggcccaggcccccacg
aacctaacgggccagaccggggctggcggaggaggagggggcggtggcggcggtggcggc
ggcggaggaggcagcaacaaagccaaccaggaccgggtcaaacggcccatgaacgctttt
atggtgtggtcccggggccagcggcgcaagatggctcaggaaaaccccaagatgcacaac
tcggagatcagtaagcggctgggggccgagtggaaagtcatgtccgaggcagagaaacgt
cctttcatcgatgaggcgaagcgtctgcgggctttgcatatgaaggagcacccggattat
aaatatcggccccggcgaaaaaccaagaccctcctcaagaaagacaagtattcgctggcc
gggggcttgctgacggccggtgccggaggcggaggcccggccgttggggtaggcatggga
gtgggagtgagtcctgctggtgtgggccagcgtctggaaagtcccggaggcacagctagc
ggaggctacgcgcacatgaacggctgggccaacggagcctaccctggttccgtggcggcg
gccgctgccgcggcagcgatgatgcaggaagcgcaacttgcctacagccagcacccaggc
gccgggggagcgcaccatcacccccacgcgcatccccaccaccctcaccacccgcacaac
ccacagcctatgcaccgctacgatatgggtgcactgcagtacagccccatctccaactcg
cagggctatatgagcgcctcgccctcgggctacgggggcctttcttacggcgccgcggct
gccgcagcagctgccgcgggcggcccacaccagaactctgcagtggcagcggcggcagct
gcagcggccgcgtcgtcaggcgccttgggcgcgctgggctcgctagtcaagtctgagcct
agcgtcagtcctccagtcacctcgcattctcgggctccgtgccccggggacctgcgcgag
atgataagtatgtacttacccgccggggaaggaggggacccggcggccgcttcggcggca
gcggcagccgcggctgcggcacagagccgactgcattcgctgccccagcactaccagagc
gccagcactggagtcaatggcactgtccccttgacacacatctag
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