Stereum hirsutum: STEHIDRAFT_100304
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Entry
STEHIDRAFT_100304 CDS
T03127
Name
(RefSeq) SWI/SNF complex subunit
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
shs
Stereum hirsutum
Pathway
shs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
STEHIDRAFT_100304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_100304
03036 Chromosome and associated proteins [BR:
shs03036
]
STEHIDRAFT_100304
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
STEHIDRAFT_100304
Chromosome and associated proteins [BR:
shs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
STEHIDRAFT_100304
PBAF complex
STEHIDRAFT_100304
GBAF(ncBAF) complex
STEHIDRAFT_100304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
18794378
NCBI-ProteinID:
XP_007306437
JGI:
Stehi1_100304
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MNPVDGQKLPKKRKLVDRNLPPSILADPTFALDSKMYQDLVEMEKKLDWTMMRKRTEVQD
ALGRTASSTRTLRLFISHTVSGQAWQTAEAGGEPSFETGQGIPAWQFKIEGRLLELPNQR
SRDKAPHRAFSTFIKHMRVEFDRDVTLYPDGNIVEWHRGATHAPLDGFTIRRMGDQPTKV
RILLHVEHYPEQFKVHPDLGSVLGIKEDSRAGVIQTLWNYIKINGLQDKADRKRIHIDAA
LRPIFQVDAIPFHILPDVVNRFLGPPEAITIHYTINPQQPPPERPQALDIEVKMEDLALK
AKMTNVTVGVQKEGVREIMQIDEKIALLAQSLHSSILKKQFMQAFADDPAKFIQTFLESQ
SRDLESILASGPSEGASVRTEDLHRSDFWKMGWVEEAVAVWDGIRLAAKPLGQS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgtcgacggtcaaaagcttcccaagaagcgcaagcttgtagaccgtaacctt
cctccatccatcctcgcagaccccacattcgcactcgactccaaaatgtaccaagacctc
gtagagatggagaagaagcttgactggactatgatgcgaaagcggacggaggtacaggac
gccttgggcaggactgccagttcaacaagaacgctccgactatttatctctcacactgtc
tccggtcaggcatggcagaccgcagaagcaggcggcgaacccagtttcgagacaggacag
ggcattccggcgtggcaattcaagattgaaggcagactactagagctgccgaatcaacga
tcaagagacaaggctccgcatcgagctttctctacgttcatcaagcacatgcgcgttgag
ttcgacagagacgtcacattgtaccccgatggaaatatcgttgaatggcaccgcggcgca
acacatgcaccgcttgacggattcacaatccgacgcatgggcgaccaacccaccaaagtt
cgtatcctcctgcacgtagaacattacccagagcaattcaaggtccatccggaccttgga
agcgtgctcggtatcaaggaggacagccgtgctggtgtcattcagacgctgtggaactac
atcaaaatcaatgggctgcaggataaagcggataggaaacgaatacatatcgatgctgca
ctgcgacctatcttccaagtcgacgccattccattccatattcttcccgacgtcgtcaac
cgcttcctaggcccccccgaagccattaccatacactacacgatcaaccctcagcaaccg
ccaccagaacgaccgcaggcgttggatatagaggtgaagatggaggatttggcgttgaag
gcgaagatgacgaatgtgacggtgggcgtgcagaaggagggagtgagagagattatgcag
atagatgagaagatcgccctgctcgcccaatcgctacactcatcgatcctcaagaaacag
ttcatgcaagccttcgcagacgacccggccaaattcatccagactttcctcgagtcacaa
tcgagagacctggaaagtatcctggccagtggaccgagcgagggtgcgtcggtgcggact
gaggatctgcacagaagcgatttttggaagatgggctgggtggaggaggcggttgctgtc
tgggacggaattcggcttgctgcgaaaccactgggccagtcttag
DBGET
integrated database retrieval system
