Stereum hirsutum: STEHIDRAFT_100564
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Entry
STEHIDRAFT_100564 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
shs
Stereum hirsutum
Pathway
shs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
STEHIDRAFT_100564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_100564
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
Pre-60S particles
RNases
STEHIDRAFT_100564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
18794394
NCBI-ProteinID:
XP_007306601
JGI:
Stehi1_100564
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MKRTQSSESSPSSSPHKSKKAKTSAPVSHGLVQEQEDGGTSGTGSGDQWTKVEKRKGKKM
KKTGVKLDAAPPKFMYVGNEIVKRKEAVTVSDIRDFVLHIIADAPPCSWIRVDNPHSIQK
VVVLLIPGLTHTVLSLPPLPTSATSNPNLPISLPLPPSPSSTPSPTSAPIAMELDGDARE
LGHEREEEAAACGGVPFICRTFSHALPTKAPGEATKMHSVLSSFFQGPVSGEEKRKRVIA
RIASERREEKNPTLYLLKLEQMIENDYPIPSYLADVFQKPEGWVETPEPQMYSLLEKQPT
ATAKIYAIDCEMCLTEDGKELTRVSVIDYKTGKVEYDTLVKPSKPIIDYLTRWSGITPAA
LAPVTTTLRQVQTRLLSLLSAKPTPILLGHSLESDLKALKLCHPKCIDTAIIYHHPRGRP
LKPGLAWLTKKWCGREIQVRGEGGHDSEEDARACMELLKRKVENGMGYGEFRTDFESIFE
RMSRSAGHAGTPNNTIRTAVVDHGNPATWHGSKATTTVPCNTDEEVYEGVKEMLGSHEFV
FGRFTGLADALGWITPKAAPTTEPAPAAPTAPSTSSIPPTPSASADFIPPSVPQPLPPVL
SSLESRLSSLHASLPPRTAFLIFSGHSDPRKMSALNAKKQAFETRVRERMRGGEALVDGY
NPAGEGGEGEGELVWRSQDARMLEEEVEKAKRGLAFFSVKV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcactcaatcctccgagtcctcgccctcgagcagcccgcacaaatcaaaaaag
gccaaaacgtcggcacctgtctcgcacgggcttgttcaagaacaagaagacggtggcacc
tctggtactggctcgggcgaccagtggacaaaagtggaaaagagaaagggaaagaagatg
aagaagacgggcgtaaagcttgacgctgctccgccgaagtttatgtatgtgggcaatgag
atcgtgaagcgcaaagaggcagtaacagtttcggatattcgcgactttgtgctccacatc
atcgcagacgccccgccatgctcctggatccgcgtcgacaatcctcactcgatccaaaaa
gtagtcgtcctcctcatccccggcctaacccacacagtcctctccctccctccccttccc
acatccgcaacctcaaaccctaaccttcctatctcattacctttaccaccatcaccttct
tcaactccctccccgacatctgccccgatagctatggagctggacggcgatgcgcgagaa
ctaggacacgaacgagaagaagaggcggcggcgtgtggtggggttccgttcatctgccgg
acgttcagtcatgcgttgcctacgaaggcaccgggtgaagcgacgaagatgcattcggtc
ttgagttcgttttttcagggtcccgttagtggagaggagaagaggaagcgtgtcattgcg
cggatagcttctgaacgccgcgaagaaaagaatcccacgctctacctcctcaaactcgaa
caaatgatcgagaacgactatcctatcccatcctacttggccgatgtcttccaaaaacca
gaaggatgggtagagacgccggagccgcagatgtactcgctcttggaaaagcagcctact
gctactgcgaagatctacgcgattgattgcgagatgtgtttgaccgaagacgggaaggaa
ttgacgagggtctccgtgattgattataagacgggcaaggtcgaatacgatactctcgtc
aaaccctccaaacccatcatcgactacctcactcgctggtccggcataacccccgccgcc
ctcgcccccgtaaccaccaccctccgccaagtgcaaacccgtctcctctccctcctctcc
gcaaaaccgacccccatcctcctcggacactcccttgaatccgacctcaaagccctaaag
ctctgtcacccaaaatgcatcgacacggcgatcatatatcatcatccaaggggaaggcca
ctcaagcccggcttggcgtggttgacgaagaagtggtgtgggagggagatacaggttagg
ggggaggggggacatgactccgaggaggacgcgagggcttgtatggagttgttgaagagg
aaggtggagaatggcatgggctacggtgaattccgcacagattttgagtccatcttcgag
cgcatgtctcgctccgcgggtcacgcaggcacgccgaacaacaccatccgcaccgccgtc
gtggaccacggaaacccggcgacatggcacggctcgaaggcgacgacgacggtgccgtgt
aatacggacgaggaagtgtatgagggcgtgaaggagatgctcggatcgcatgagtttgtg
ttcgggaggtttaccgggttggcggatgcgcttgggtggatcacgcctaaagccgctccg
accactgagcccgcacctgcagcaccaacagccccctcaacatcctccattccacctaca
ccctcagcttcggctgacttcattcccccttcagtcccacaacccctcccacccgtcctc
tcctccctcgaatcccgtctctcatccctccacgcctccctccctccacgaaccgccttc
ctcatcttctcagggcactccgacccgcgcaaaatgtcggctctgaacgcgaagaagcag
gcatttgagacgagggtcagggaaaggatgaggggcggagaagcgttggtggatgggtat
aatccggcgggggagggtggggagggagagggagagttggtgtggaggagtcaggatgcg
cggatgttggaggaggaggtggagaaggcgaagaggggcttggcgtttttcagtgtgaag
gtttga
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