Stereum hirsutum: STEHIDRAFT_101767
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Entry
STEHIDRAFT_101767 CDS
T03127
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_101767
Enzymes [BR:
shs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STEHIDRAFT_101767
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
90S particles
Helicases
STEHIDRAFT_101767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NOA36
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
18794471
NCBI-ProteinID:
XP_007307603
JGI:
Stehi1_101767
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MQAFHLLSRGGVQFDKKRFKKDVDLFNSTTKPKGGSKAVKTSAEGELPAELDFFKYAKGG
SGTKRKAASASGEAESSVRMGKKRKTSEDSEEEDDEDDDEDEEDDEEDKEDHDDAPLRPK
QRVTAKGSNVPAAADTFEDLAKRYHIPPLIVSNIAEYGYQYPTGIQSHGIPILMESRDLA
AISPTGTGKTLSYLLPLMSQLGSPSSSSSSEAGSGVRAVILAPTRELAHQIHNECLKLAQ
KRKWRIVLFSKATAATLADKNVRSKVDVIISTPLRLVTSLQSGDLELNNVRHLVLDEADR
MLDAEFLDQVQEVIAACTHPKIQKAVFSATLPASAEKVAMGMLNDPIRVVVGLKDTPLPL
ISQSLTYVADDASKLPTLLTYLSQPYNPPLLIFVSSQPRASSLAEELVISSVPNVDVLHA
GMSRKEREDAVGRMRKGESWVMVTTEVMARGMDFKGVREVVNYDFPRSVQSYVHRVGRTG
RAGREGKAITYFTNDDAPFLKPIANVLLQSGSSVPEWILKLPKPSKMKRKQMGKVQRAEA
VNPARRIGRSEAIKKRDMVAASKRRKGKDEKKGDSKEEVEEGSD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttccacctcctctctcgtggaggtgtacagttcgacaaaaaacgcttcaag
aaggatgtcgatctgtttaacagtaccacgaaacccaagggtggatcgaaagccgtcaag
acgtcagcagagggtgaactcccggcagagctcgactttttcaagtacgccaagggtggt
tctggtacgaaacgcaaagctgctagtgcatcaggagaggctgagtcgagtgtgaggatg
gggaagaaacggaagacgagtgaggacagcgaggaagaggacgatgaggacgatgatgaa
gacgaggaagatgacgaggaggacaaggaagaccacgatgatgctccgttgcggcctaaa
caacgcgttacggcgaaaggatccaacgtccctgcagcggcagatacttttgaagacttg
gccaagcgctaccacataccccctctcatagtgtcaaacatcgcagagtacggatatcaa
tatcctacgggtattcagtctcatggcatacccattctgatggagtctcgcgacctcgcc
gcgatatcacccacaggaaccggtaaaaccctatcctacctcctacccctcatgtcccaa
ctcggctctccatcctccagctcttcatcagaggctggttccggtgtacgagccgtgatc
cttgcacccacgcgcgaactcgcacaccagatccacaacgagtgcttgaagctggcacag
aagcgaaagtggagaatcgtgttattcagtaaggccacagcagcgaccctggccgacaag
aatgtgcggtctaaagttgacgttatcatcagtactcccctgcgactggtcacgtctctg
cagtccggagacctcgagctcaacaatgttcgtcatctcgtattggacgaagcagatcga
atgctcgacgcggagttcctagaccaagttcaagaagtcatcgctgcttgcacacatcca
aaaattcaaaaggccgtcttcagcgccaccctccctgcatctgcagaaaaagttgccatg
ggcatgctcaacgatcccattcgcgtcgttgtcggtctcaaagataccccccttccactg
atctctcaatcccttacctacgtcgccgacgatgcctcaaaacttcccacactcctcacc
tatctctcccaaccatacaacccacccctcctcatcttcgtttcctcacaacccagagct
tcctccctcgccgaagaactcgtcatctccagtgtccccaacgtcgacgttctccacgcc
ggtatgagcagaaaagagagggaagacgcggtcggtcgaatgagaaagggtgagagttgg
gttatggtgactaccgaggtcatggcgagaggtatggatttcaaaggggtacgggaggtc
gtgaattacgattttccgcggagtgtgcagagttatgtgcacagagttggtcgaacggga
agagcagggcgtgaaggaaaggcaataacatatttcacgaacgacgatgcacccttcctg
aaaccaatcgccaacgtcctcctccaatctggttcctcagtccccgagtggatcctcaag
ctccccaaaccttccaaaatgaagcgaaagcagatgggcaaggtacagcgcgcggaggcc
gtcaatccggccaggaggatagggcggagcgaggcgatcaagaagcgagatatggtggct
gccagtaagaggcggaaagggaaagatgagaagaagggggacagtaaagaagaggtggaa
gagggatcggactga
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