Stereum hirsutum: STEHIDRAFT_105350
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Entry
STEHIDRAFT_105350 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
shs
Stereum hirsutum
Pathway
shs03020
RNA polymerase
shs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STEHIDRAFT_105350
09124 Replication and repair
03420 Nucleotide excision repair
STEHIDRAFT_105350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_105350
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_105350
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_105350
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
STEHIDRAFT_105350
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
STEHIDRAFT_105350
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
STEHIDRAFT_105350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
18794736
NCBI-ProteinID:
XP_007310426
JGI:
Stehi1_105350
UniProt:
R7S147
LinkDB
All DBs
Position
Unknown
AA seq
170 aa
AA seq
DB search
MFFIKELTHTILLHPSYFGPRMLQFLESKLYSDVEGTCSGQFGYIIAVVSILDIGKGMVL
GGSGQAEFVTRYRAIVFKPFKGEVVDGVVNNVNKMGFFADVGPLTVFVSHQLIHPDMKFD
PTSNPPSFASEEQIIEKNTKVRLKIVGTRVDATEIFAIGTIKEDHLGVIE
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcatcaaagaactcacgcacaccatcctcctccacccctcctacttcggcccc
cgcatgctccaattccttgaatcaaaactctactcagacgtagaaggaacatgttcaggt
caatttggttacattatcgccgtcgtgtcgatattggatatcgggaagggaatggtgctc
ggagggagtgggcaggctgagttcgtgacaaggtaccgggcgatcgtgttcaagccgttc
aagggggaggtcgtggatggagtggtcaataacgtgaacaagatgggtttcttcgcggac
gttggacctttgaccgtcttcgtttcacatcaactcatccaccccgacatgaaattcgac
ccaacatcaaatccaccatcattcgcctccgaggaacagatcatcgagaaaaacacaaaa
gtgcgcctaaaaatcgtcggcacccgtgttgacgccaccgaaatcttcgctatcgggacc
atcaaggaggatcatctaggtgtcattgaatga
DBGET
integrated database retrieval system
