KEGG   Stereum hirsutum: STEHIDRAFT_117367
Entry
STEHIDRAFT_117367 CDS       T03127                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
shs  Stereum hirsutum
Pathway
shs03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    STEHIDRAFT_117367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shs03021]
    STEHIDRAFT_117367
   03036 Chromosome and associated proteins [BR:shs03036]
    STEHIDRAFT_117367
Transcription machinery [BR:shs03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     STEHIDRAFT_117367
   Coactivators
    SAGA/TFTC/STAGA complex
     STEHIDRAFT_117367
Chromosome and associated proteins [BR:shs03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     STEHIDRAFT_117367
    STAGA complex
     STEHIDRAFT_117367
    TFTC complex
     STEHIDRAFT_117367
    SAGA complex
     STEHIDRAFT_117367
    SLIK complex
     STEHIDRAFT_117367
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 TFIID_NTD2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st WDR55 Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_SPT8 WD_LRWD1 eIF2A LisH Beta-prop_HPS5 Cytochrom_D1
Other DBs
NCBI-GeneID: 18796093
NCBI-ProteinID: XP_007298796
JGI: Stehi1_117367
LinkDB
Position
Unknown
AA seq 815 aa
MSAATPSSSTPEAGTSPAAVPQDIPSNASSVDRYVLEYLRTHGHTSAEQAFSESLESDDK
GKGREMSGTTITADELVKKLTSMLDRSGDISVQNALKDITSLSNTSNLQSLLSSIGPGGT
EEILTLDPTDKQEGFRELESWVDGSLDMYKPEFRPILFPIFCHFYLDLVQYGFKDAALDF
FKTFSPSLEPMHSSTLHRLSTLRLPSHVQHDEIANQFRNAKYVVRMSRTGFNLLVGWLTE
GIGGEGTGAGVGFSGDKGKRGRSAVMRVVNNHLRFDVTTASPSAVSANSWEESTGLLSSL
IPQPEGSTSSSALLTNPQAFNTSKGDLKLGPPPMSDELRAETEKMLRDQAMIDRDPYAQN
DANNVRPPPVPGVVAPTVAEQPPHPPTFKTVDIQREVERVRDARKRIRLEPSALHAVDAN
SPQAAAARQRALPSICAYTLHDVPEGSPCVTFSQDTSLMAAGFEESYIRIWSLKGESLNV
LKSDFNVNNIKDTSSIRKIREKGGPSTRKLIGHSGPVYSLAFDPIAGSSGPPKYLLSASA
DSTARLWSLDTMTNVVVYRGHQNPVWDVAWSSTGIYFATASRDKTARLWSTDRTSALRIY
AGHQNDVDCVRFHPNSLYLATGSSDKTARLWDVQKGSCLRIFVGHQDIITTLAFSPDGRY
LATAGEDLAVNLWDLGSGRRIKKMLGHTASIYSLAFSAESSMLVSGGADWTVRCWDVKAP
GGLAEKDKSKENGVASGAGVNGMVNGHGNGAGAGHGAAAGGGAGGNKNPYVIDTVETTDL
MAMFPTKRTPITNVHFTPRNLCLVAGPYLSPDQHR
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgtcggcggccactcctagctcgtccacaccagaggccggaacctcaccagccgccgtt
ccgcaagatatcccatccaatgcatcctccgtcgaccgctacgttctcgaataccttcgt
acacatggacatacgtctgctgaacaagctttcagtgaatctctggaaagcgatgacaaa
gggaaagggcgagagatgtcgggcacgaccattacagcagacgagcttgtcaagaagctc
acctccatgctagaccgttccggtgacatttcggtccaaaacgcactcaaggacattaca
tccttgagcaatacatcgaatctgcaaagcctactttcttctattgggcctggaggtact
gaggagatcttgacgctggatcccactgacaagcaggaggggtttcgagaactcgagtct
tgggttgacggatcactggatatgtacaagcccgagttccgcccaatactctttccaata
ttttgccacttctatctcgacttagtgcagtacggcttcaaagacgctgccctggacttc
ttcaaaactttctcaccatcactcgagcccatgcacagctcgactctccaccgactctct
acacttcgcctcccatcacacgttcaacacgatgaaatcgccaaccagttccgtaatgcc
aagtacgtcgtacgcatgagccgaacaggatttaacctactagtgggctggctcacggag
ggtataggaggtgaaggcaccggtgcaggtgttgggttctctggagacaaaggaaagagg
ggtcgatctgccgtgatgcgtgtcgtgaacaaccatttgcggtttgacgtcactaccgcc
agcccaagcgctgtctcggccaactcatgggaggaatccaccggtcttctttcctccctc
atccctcaaccagaaggctccacatcttcctcggcactactaacaaacccgcaggctttc
aacacttccaaaggcgaccttaaacttggtccgccaccaatgtcggacgaactgcgagca
gagacggagaagatgttacgggatcaggccatgattgacagggacccgtacgcgcagaac
gacgcgaacaacgtacggccgccacctgtacctggtgtcgtcgcaccgactgtcgcagaa
cagccgccacatcctccgaccttcaagacggtggacattcagagagaggttgagagagtg
agggatgcgaggaagaggatacgattagagccttcggctctgcacgcagtggatgcgaat
tcaccccaggctgctgctgcgagacaacgagctcttccgagtatatgtgcctatacattg
catgatgttcctgaaggatcgccttgtgttacattttcgcaggatacgtcgctgatggcc
gctgggtttgaagagagctatattcgaatatggagcctcaagggcgaatcactcaacgtg
ctcaaaagtgacttcaatgtcaataacatcaaagacacatcctccatccgcaaaattcgt
gaaaaaggcggaccctcaacgcgaaaactaataggccacagcggacctgtctactctcta
gccttcgaccctatcgcaggttcctcaggccccccaaaatacctcctctccgcctcagca
gattctactgcccgactatggtctctagacactatgacgaatgttgttgtctatcggggg
catcagaatcctgtgtgggatgtggcttggagtagtacagggatctatttcgcgacggcg
agcagggataaaacggcgaggctttggtcgactgataggacgtcggcgttgaggatttat
gcgggtcatcagaatgatgtggactgcgtcaggtttcatccgaactcgttgtacctggcg
actggctctagtgataagacagccaggctttgggacgttcagaagggttcatgtctacgt
atattcgtgggccatcaagacatcataacgacattggccttcagcccggacggcagatat
cttgccacagcgggtgaagatctagccgtgaatttgtgggacctcggttccggtcgacgc
atcaagaaaatgctgggccacactgcatcgatttactccctcgcattcagcgcagaatcg
agcatgctcgtttctggaggtgcggattggacggtcaggtgttgggacgtgaaggctcca
ggtgggttggcggagaaggataagtcgaaggaaaacggggtggcgtcgggggctggtgtg
aatgggatggtcaatggtcatggcaatggggctggagcaggacatggggccgcggcaggt
ggtggcgcgggaggaaataagaacccgtatgtcattgataccgtggaaacgacggacctc
atggcaatgttcccaacgaagaggacaccgatcacgaatgttcattttactccgaggaat
ctatgtctcgtcgctggaccttatctttctcctgaccagcaccgatga

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