Stereum hirsutum: STEHIDRAFT_118186
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Entry
STEHIDRAFT_118186 CDS
T03127
Name
(RefSeq) DNA repair helicase rad25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
shs
Stereum hirsutum
Pathway
shs03022
Basal transcription factors
shs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
STEHIDRAFT_118186
09124 Replication and repair
03420 Nucleotide excision repair
STEHIDRAFT_118186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_118186
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_118186
Enzymes [BR:
shs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STEHIDRAFT_118186
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
STEHIDRAFT_118186
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
STEHIDRAFT_118186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-GeneID:
18796249
NCBI-ProteinID:
XP_007299814
JGI:
Stehi1_118186
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MSGKRPADDSAYPSSSSKRARQSRPTDADAYLDVDDDSNAANSIDSSLVPRGATINLGAL
TRKLAQERRAAHAADNDSSLSAHRRQQETLVSHIFMDQDFSWLHLKSDHASRPLWISPED
GHIILEAFSPIAEQAQDFLIAISEPVSRPSFIHEYKLTSYSLYAAVSVGLQTEDIIEVLN
RLSKVPVPEAITTFIRERTLSYGKVKLVLKHNKYFVESSHPDTLQLLLKDSIIRNARVTT
QATDSKMTTFTTAKAPVKGNLVIPGTKEAEKKKDDASKGPVPAAGNADADLFTSVVGVEG
DEIDEDDDNVHAFQIDDAKIDDVKKRCNELEYPMLEEYDFRNDTVNANLDIDLKPATVIR
PYQETSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSCLVLCTSSVSVMQWRSQ
FMQWSNVTDRQIAVFTADQKEKFAGDSGIVVSTYSMVANTGNRSYESRKMMEFLTSREWG
FILLDEVHVVPAAMFRRVVTTIKAHSKLGLTATLVREDDKIADLNYMIGPKLYEANWMDL
AAKGHIANVQCAEVWCPMTPEFYREYLREQTRKRMLLYCMNPRKFQACQFLIKYHEDRGD
KIIVFSDNVFALEAYAKKLKKPYIHGGTGQVERMRILQFFQHNPQVNTIFLSKVGDTSID
LPEATCLIQISSHFGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMFYSTKRQ
QFLIDQGYAFKVITHLDGLENLPDLVYKSQSEQIELMQSVLLANESAAELGTDIRAGEGD
LAGTITSKDFGAPPGRVPAAQRTTGSLTALSGAAHMSYIEQNKSANKRLAREAAPRNKLF
VKRDRDMAAAKKEARAAGRG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaaacgcccagctgatgatagcgcatacccctcctcgtcttccaaacgcgcg
aggcaatcccgtcctactgatgcagatgcttaccttgatgtcgacgacgactccaatgct
gcaaactccatagactcttcactcgttccccgcggtgccacaataaacctcggcgccctc
acccgcaaacttgctcaggagcgtcgtgctgcccacgctgccgacaacgactcttctctc
agtgcccaccgaaggcagcaggaaaccctcgtttcgcatattttcatggatcaggacttt
tcgtggcttcatttaaaatctgatcacgcctctcgtcctctctggatcagcccggaagat
ggtcatatcattctcgaggcgttctctcccatcgccgaacaggcgcaggacttccttatc
gccattagcgagcccgtcagcaggccgagtttcatccacgagtataagctcacgtcatac
tctctgtacgccgctgtctctgtcggcctacaaacggaggacatcatcgaggttcttaat
cgcttgtcgaaggttcctgtgccggaagcaatcacgacattcattcgcgagcgtacactc
tcgtacggcaaggtcaagctcgtcttgaaacacaacaagtactttgtagaatcgagtcat
ccagatacactccaactgttactgaaagactcgatcatccgcaatgctcgagtcacaaca
caagcaacggacagcaagatgacgacgttcacgactgcaaaggcccctgtcaagggaaat
ctagtcattccaggaaccaaagaggccgaaaagaagaaggacgatgcatcgaaaggtcct
gtaccagcggcggggaatgcggatgcagacctttttacttccgtggtcggtgtcgagggt
gacgagatcgacgaggacgacgacaacgttcacgctttccaaattgatgacgccaagatc
gacgatgtgaaaaaacggtgtaatgaactggaatatccaatgctcgaggagtacgacttc
cgtaacgacaccgtgaatgccaatctcgacatagatctcaagccagctaccgtcatccga
ccgtatcaggaaacaagcctgagtaagatgtttggtaacggtcgtgcgagatcaggtatc
atcgtgttaccgtgtggggccgggaaaacgcttgttgggattaccgctgcctgcactatc
aagaaatcatgtctggtgttatgcacgtcgtcggtgtccgtcatgcaatggagatcacaa
tttatgcaatggtcaaacgtgactgaccgtcagattgctgtcttcaccgccgaccagaag
gagaagtttgcaggagatagtggtatcgttgtgtctacatattcgatggtagcgaacaca
gggaaccgctcttacgagtctaggaagatgatggagttcttgacctctcgagaatggggt
ttcatccttctagacgaagttcacgtcgtgccagcggcgatgttccgacgcgtagtgacg
accatcaaggcccactctaagctcggtttgacagccaccttggtacgcgaagacgacaag
attgcggacctgaactacatgatcggacccaagttatatgaagcgaactggatggatctt
gctgctaaaggtcacattgcaaatgtacagtgcgcggaggtttggtgtccgatgacgcca
gagttctatcgcgagtacttacgggagcagacgaggaaacgcatgcttctctactgcatg
aacccgaggaagttccaggcttgccaattcttaatcaagtaccacgaagatcgaggagac
aagatcatcgtgttctccgataacgtgttcgcactagaggcatacgccaaaaagctaaag
aaaccgtacatccacggcggaacgggtcaggtggagcggatgcggatcttacaattcttc
cagcacaatccgcaagtgaacacaatcttcctgtccaaggttggcgacacttccatcgat
ttaccggaggctacttgtttgatccaaatatcgtcgcattttggttcgcgccggcaagag
gcacagcgattgggtcgtatcttgcgtgccaagaggcggaacgacgagggctttaacgcg
ttcttctactctctagtctctaaggacacgcaggagatgttctacagcacgaagcgacag
cagtttctgatcgaccaagggtacgctttcaaggtgatcacgcatctggacgggctcgag
aatctgccggacctggtgtacaagtcgcagagtgagcagatcgagctgatgcagtcagtg
ctgctcgcgaacgagagcgccgccgagcttgggaccgacattcgagcgggagagggggac
cttgcagggactatcacgtcgaaggattttggggctccgccgggaagggtaccggctgcg
caacggacgacagggtcattaacggctctgagcggagctgcgcacatgtcctacatcgaa
cagaacaagtcggcgaacaagcggctggcgagggaggccgcgccacggaacaagttgttc
gtgaaacgagaccgagatatggcggcggcgaaaaaagaggcaagggcggcgggacgagga
tga
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integrated database retrieval system
