Stereum hirsutum: STEHIDRAFT_118517
Help
Entry
STEHIDRAFT_118517 CDS
T03127
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
shs
Stereum hirsutum
Pathway
shs03013
Nucleocytoplasmic transport
shs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
STEHIDRAFT_118517
03015 mRNA surveillance pathway
STEHIDRAFT_118517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_118517
Enzymes [BR:
shs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STEHIDRAFT_118517
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
STEHIDRAFT_118517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
18796310
NCBI-ProteinID:
XP_007300186
JGI:
Stehi1_118517
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MEKDADGFYTGPGSPPAAATAAPKAVAEAPTPAPGKDDEKKDEEEPKAPGAHKETASELL
KSSFDVEVTLADQQQDPNSPLYSVKTFEELNLHADLLSGIYAMGFTRPSKIQERALPLLL
ASPPSHMIGQSQSGTGKTAAFVLAMLSRVDFNINKPQALCMAPSRELARQIMSVVVAMGK
FTPVQTEFAIKDGLPKGASKVTAHIIVGTPGTMTDLIRRRVIDVEEVKILVLDEADTMVG
QDGMGDQTLRVKNSLPKNKNVQIVLFSATFPKHVHQFAQKFAPNANKIELRRNEITVENI
KQFYMDCKDEVKKYDVLVQLYHILTIGQSIIFCERRETADKISKRMTDEGHKVASLHGAK
DSAERDAIIDRFRDGKEKVLITTNVIARGIDIMQVNMVVNYDLPLMSDSRGGLKPDVETY
IHRIGRTGRFGRKGLSINFVHNDKTWKQMQDIEAVTGKVITKVETDDLDVMEETLKKYLK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacgctgacgggttctacactggtcctggttcccctcctgctgctgctacc
gctgcgcctaaagctgttgctgaggcgcctacacctgcacctggaaaggatgacgagaag
aaggatgaggaggagccaaaggctcctggagcccataaagaaactgcatctgagctgctg
aagtcatctttcgatgtggaggtaacactagcggatcaacaacaagatccaaattcgcct
ctgtatagtgtgaaaacattcgaggagcttaatctacatgcggacttgttatctggtatc
tatgcgatgggcttcacacgaccgtcgaagatccaggagcgtgcattacctctgcttctt
gcatcaccaccatcacatatgattggccagtcccagtccgggacaggcaaaaccgccgcc
ttcgtcctcgccatgctctcccgtgtcgacttcaatatcaacaagccacaagcactatgt
atggccccttcgcgtgaactggcccgccaaatcatgtccgtcgtcgttgccatgggcaag
tttacgcccgtgcagaccgagtttgccatcaaggatggtttgccgaagggggcgtcgaag
gtgacggcgcatatcattgtggggacaccggggacgatgacggatttgattcggaggagg
gtgatagatgtggaggaggtgaaaattcttgtgctcgatgaggcagatacgatggtggga
caggacgggatgggtgatcagacgttgagggtgaagaactcactaccgaaaaacaaaaat
gtccagattgtcctgttttcggccacattcccaaagcacgttcatcagttcgctcagaag
ttcgcaccaaacgcgaataagatcgagctaagaagaaacgagatcactgtggagaatatc
aagcaattctatatggactgtaaggacgaggtcaagaagtatgacgtgctagtccagctg
tatcacatcctcaccatcgggcagagtatcatcttctgcgagcgccgcgagaccgcagat
aaaatttccaaacgcatgaccgatgagggccacaaagtcgcctccctacatggtgctaaa
gactcggcagaacgagacgctatcattgacaggtttagggacgggaaagagaaggtgctc
atcacgacgaacgtcatcgcgcgggggatcgatatcatgcaagtcaacatggtggtgaac
tatgatctgccgctcatgagcgatagccgagggggcttaaagccggatgtagagacctat
attcatcggattggccgaacgggccgttttgggcgcaagggtctctcgatcaacttcgtc
cataatgacaagacgtggaagcagatgcaggacattgaggctgtcacgggcaaggttatc
acgaaggtggagacggatgatctcgatgtaatggaggagacgctgaagaagtacttgaag
taa
DBGET
integrated database retrieval system
