Stereum hirsutum: STEHIDRAFT_119931
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Entry
STEHIDRAFT_119931 CDS
T03127
Name
(RefSeq) SWIRM-domain-containing protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
shs
Stereum hirsutum
Pathway
shs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
STEHIDRAFT_119931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_119931
03036 Chromosome and associated proteins [BR:
shs03036
]
STEHIDRAFT_119931
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
STEHIDRAFT_119931
Chromosome and associated proteins [BR:
shs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
STEHIDRAFT_119931
PBAF complex
STEHIDRAFT_119931
GBAF(ncBAF) complex
STEHIDRAFT_119931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
18796579
NCBI-ProteinID:
XP_007302099
JGI:
Stehi1_119931
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MDSPKRTASPSPDASESKRIRLTVPQQNQGASPVDPENAQGKRSELDPIQGGELGNIPNY
PPSSPGPETGGKVTLLKPEGEGVDDDNADVEMGDGQDDDGESGDDNDDEDPAQLEANRQR
LEEQARKYLAAQTHQVIIPSYSAWFDMSAIHAVERRALPEFFNGKNRSKTPAIYKDYRDF
MVNTYRLRPTEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDPDQRPAALAPPFT
GHFRVILDTPRGLQSLHPGSRPSQHPGGQGPNGSTTKRSSGPTPASLELRSSIYQTTSKS
ARQVSESEAAILANGTTSAGSNARPTNAVTYKCDTCGVDCTAVRYHSLKVKDFELCQPCY
LDGRFPSTMFSGDFVRLTNSASVSGNQHSAANGGDAWSDQELLLLLEGVEMYDDDWSLIE
EHVGTRSAQQCVRKFLELPIEDPYLESEGDMGAMRYARVPFEQADNPVMSVVAFLAGVVG
PGVAAEAAKTALGELTKGEEKESKVPESDKEEKEKEKEGEKAATVEGEEGGHKDNEDDKM
DEDKVEGELSTPQQPEKAEASSSKPTTPAATGAESSDAQATSSPAAEKPGPGVPHSKVVR
AANLALKASAKAASSLVSAEETNIRSTLAAVIKLQLTKLELKMSQFEELEDLLEEERRAL
EGARLALVSERMTLKKNLENVRGELSKHAQNQGAGGAGNMQGIVAAASQANMGTSSQGTR
MQDISLDGMAMEGDGGPLNGGNVVALS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggactctcccaaacggaccgcgtctccctctccagacgcatccgagtcgaagcgtatt
aggctaaccgtgccacaacaaaatcaaggtgcatctcctgtggaccctgaaaacgctcaa
ggcaagcgtagcgagctcgaccccatccagggcggcgaactcggtaacattcccaactac
cccccgtcttcaccaggaccagaaactggaggcaaggtcaccttgctcaagccagaaggc
gagggcgtggacgacgacaatgccgacgtcgagatgggagatggtcaggatgacgatggc
gagtcgggagacgataatgacgacgaagatcccgcccaactcgaggcgaataggcagaga
ctggaggaacaggcgcgcaaatacctggctgcacagacgcatcaagtcatcattccctct
tattccgcctggttcgacatgtctgctatccatgcggtcgagcgacgcgccttacccgag
ttcttcaacggcaagaacaggtctaagacgcctgccatctacaaggactatcgcgacttt
atggtcaatacctaccgtcttcgccccacagaatacctcacagttactgcttgtcggagg
aatcttgctggagacgtgtgcgctattatgcgtgtacatgccttcttggagcaatgggga
ttaataaactaccagatcgacccagaccagcgccccgccgccctcgcccctcctttcacc
ggtcacttccgcgtcattctcgacaccccccgcggccttcaatcccttcaccccggctcc
cgcccctctcaacacccaggcggccaaggccccaacggctcaaccaccaaacgatcttcc
ggccccacccccgcctccctcgaactccgctctagcatctaccaaaccacgtccaaatcc
gcccgccaagtctccgaatccgaggctgctatcctcgccaacggcaccacatctgctggc
tcgaatgcccgtcccacgaacgccgttacctataagtgtgacacgtgtggcgtggattgt
acggcggtgcggtaccattccctcaaagttaaggatttcgagctctgtcagccttgttat
ctcgacgggaggttcccttcgaccatgttcagcggcgacttcgtgcgcctgacgaactcg
gcgtccgtcagcgggaaccagcactctgcagcgaacggaggggacgcatggtccgaccag
gaattgctgctcttgctcgagggcgtggagatgtacgacgacgactggtcgttgatcgag
gagcacgtcgggacgcggtcggcgcagcagtgcgtgcgcaagtttttggagctgccgatc
gaggatccgtacctcgagagcgagggagatatgggggcgatgaggtacgcgagagtgccg
tttgagcaggcggataatccggtcatgagtgtcgtcgcgtttttggcgggggtggttgga
cccggggtcgcggctgaggcggcgaagacagcgttaggagagctgacgaagggagaagag
aaggagagcaaggtgccggagtcggacaaggaggagaaagaaaaggagaaagagggagag
aaggctgctacggtggagggcgaagaagggggacacaaggataacgaagacgacaagatg
gatgaggataaggtggagggagaactatctacgcctcaacagcctgaaaaggcggaggcc
tcatcgagcaagccgacgactcctgctgcaacgggcgcggaatcgagcgacgctcaggcg
acttcgtcacctgcagcagaaaaacctggccctggcgttccgcattccaaggtggtccgc
gccgccaatcttgccctgaaggcgtccgcgaaagccgcatcttcactggtatctgccgaa
gaaaccaacatccgttcaactctcgcggccgtgatcaagctccaacttacgaaactcgag
ctcaagatgtcacaattcgaagaactggaggatttattggaggaggaacgaagagcactc
gagggcgcgagactggctttggtcagcgagaggatgacgctgaagaagaacctggagaac
gtgagaggagagttatcaaagcacgcgcagaatcagggagcgggcggggctgggaatatg
caagggattgtcgccgcggcgtcgcaggcaaatatgggaacgtcgagtcagggtaccaga
atgcaggatatttccctggacgggatggcgatggagggggatgggggtccgttgaatggt
gggaatgtggtggcgctttcttaa
DBGET
integrated database retrieval system