Stereum hirsutum: STEHIDRAFT_121591
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Entry
STEHIDRAFT_121591 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
shs
Stereum hirsutum
Pathway
shs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STEHIDRAFT_121591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_121591
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
STEHIDRAFT_121591
mRNA degradation factors
5'-3' decay
Decapping complex
STEHIDRAFT_121591
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
18796888
NCBI-ProteinID:
XP_007304366
JGI:
Stehi1_121591
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MSFFGFEQNNDLQREKQDFAAGRKGDEDLAVYTWGEESYDGLGDVLQEGGDELNDETFGG
TGAIGKDFDFAQQALPSDDQLVSSAKFTENSGFIDQKLPGFFETASPGPGTPSLEGLSIS
EQGQQQPSRQPHSLWDERSPFSVLPRMNGTLRTQADLNRTTSSPRLGQYSNGSTPSTSQA
QAHVPSPGLSAAQLNPQGLVNQGGIRTLEEIEAEMRAAAQRTRTAAVATQRQQLLQEQQQ
QQQQYYQQQQRTAPPRMHPQSQSPRFHQQQQHQQLLLQQQREQQLLEQQLREQQILREQQ
IRDRDRQRQLQELQLQEQLRLEEIERQMRAARLQELQHQQQQQQQLLQGQYLSRGVTPQQ
ALALADMATQQQLERRRHRASPALIDSHMQVAYEQANGQLLPQNIQLQQRILSELAQAEF
LQNMQPSTEEDPNVVRAQVMRRIMETERMEEKRRLKAAKINHMSRYNDLMTQSDKDFITR
IQVSQLVTQDPYAEDFYAQVYGAIIRSRMGMQPSDDRVLKFGSGGGVGLGLGQKGSGRRP
NAMQKMEQQVERIVTNARLREKEKGMHSVHSLQGALGKTSGRSYKAAPRQLLQVEPGNAN
GNTSPAATHAHISREDAIRQEGEGAAKEAAKIGAAALGTADDSDGPIHRDPLTTREALIT
LESLYDLALNIEQIGREQPDDPEDFEAMGIWEAQLREMIQQLFEKLQVMAPLETSTPHPF
ISLITPAKGKKLLPRIYKHFDQQQMLTMLTLLVACFSQMDIVVHASLLDTPIPSQQQADI
ERQTQIFLGSVISTILPVVAKAGLRLVSGLLGLLLERNDIVAISQTKPGMAFLTLFLSRA
ELIKQNLATGVDMTDLPSPDEMQQWEHLFNHIFQLLLPHLPFLFPSTRLAMNIAALPPAE
QAQYAHQMQTDALDQPVWQFFATYALHSSMEQQQALVTALREKVLENVASAKRGWVADEE
EMVAKLANVNLFLKVLGLHSDQITI
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcttcggattcgagcaaaacaacgatcttcaacgagaaaaacaggacttcgct
gcgggcaggaagggtgacgaagatctggcggtctatacatggggagaggaaagctatgac
ggactgggcgacgttttgcaggagggcggggacgagctgaacgatgagacatttggcggc
acgggggctatcggaaaggactttgattttgcgcagcaggctctgccttcggacgaccag
ctcgtctcttcagcgaaatttacagagaactccggcttcatcgaccaaaagttgcctggt
ttcttcgagacggcttcgcctgggcccggtaccccgagtctcgaaggcctatcaatctct
gagcaaggccagcagcaaccttcccgtcaacctcactcgctatgggacgaaagatctccg
ttctctgttcttcctcgtatgaatggcactcttcgtacacaggccgatctcaatcgcaca
acatcgtctccgcgtcttggccagtactcgaatggttcaaccccgtctacgagccaggcg
caagcccatgtaccctctcccggcctctctgcggcccagctgaatccccagggtctcgtc
aatcaaggtggaattcggactcttgaggagatcgaggcagagatgcgggctgcagctcaa
cggacacggaccgccgctgtcgccactcaacgtcaacaactccttcaagaacagcagcaa
cagcagcagcagtactatcagcagcaacaacgaaccgcccctccgcggatgcacccccag
tcccagtcgccccgtttccatcagcaacaacagcatcagcaacttctgctccaacagcaa
cgggagcaacaattgttggaacagcagttgcgggaacagcagatcttgcgggagcagcag
atcagagatcgcgacaggcagaggcagcttcaggagcttcagttgcaggaacagctgagg
ctggaggagatagagcggcagatgagggcggcgaggcttcaggagttgcagcaccaacag
cagcagcagcagcagcttttacaaggccagtatctgtcgagaggcgtgaccccacagcag
gctttggctctggcggatatggcgactcagcagcaactcgagcggaggagacaccgtgct
tcgcctgcgctgatcgattctcacatgcaagtcgcatacgagcaggccaatggtcagctt
cttccgcagaatatccagttgcagcagcggatattgtctgagcttgcgcaggccgagttc
ttacagaacatgcagccgtcgacggaggaagacccaaatgtggtgagggcccaggtgatg
aggaggatcatggagacggaaaggatggaagagaagaggagattgaaggcagcgaaaata
aaccatatgtcccgatacaacgatctgatgacccagtcagacaaggacttcatcactcgc
atccaagtttcgcaactcgtcacccaggacccgtacgcagaggacttctacgcacaagtc
tatggcgctatcatccgttctcgaatgggcatgcaaccttctgacgatcgtgtgctcaag
tttggatctggtgggggtgtcggactgggccttgggcagaaaggctccggcagacggccg
aatgcaatgcagaagatggagcagcaggtagagaggatcgtgacaaacgcaaggttgagg
gagaaggaaaagggcatgcactctgtacacagcctgcaaggtgctttgggaaagacgtcc
ggaaggagttacaaggccgctccgcgtcaacttctccaggtcgagccaggaaacgctaac
ggaaacaccagtcctgcggcgacccatgcgcatatttctcgtgaggacgccattcgccag
gagggtgaaggtgctgctaaggaagctgctaagatcggtgctgcggctctcggaaccgct
gacgattcggatggaccaattcacagggacccactcaccacgcgagaggctttgatcact
ctggagagcctttacgaccttgcactgaacatcgagcaaatcgggagagaacaaccagat
gatcccgaagacttcgaagctatgggcatctgggaagcacagctaagagaaatgatccag
cagctctttgagaagcttcaggtcatggccccgctcgagaccagcactccccatcctttc
atctccctcatcaccccggcgaagggcaaaaagcttctcccccgaatctacaaacacttc
gaccaacagcagatgctcaccatgctcaccctcctcgtcgcctgtttctcacaaatggac
atcgtcgtccatgcttccctccttgacacgcccattccgtcgcaacagcaagcggatatt
gagaggcagacccagatcttccttgggagtgtcatctcgactatattgcctgttgtggcg
aaggccggtttgagactcgtcagcggcttgttaggcttgctgttggagaggaacgatatc
gtggcaatctcgcagactaagcccgggatggccttcctgacacttttcctgagtcgggcc
gagctcatcaagcagaatcttgcaacaggagtcgatatgaccgaccttccatccccagat
gagatgcaacaatgggaacatctcttcaaccacatcttccagctcctgctcccacacctg
ccgttccttttcccgtctactcgcctcgccatgaatatcgccgcactcccacccgccgaa
caagcccaatacgcacaccaaatgcagaccgacgcgcttgaccagcccgtctggcagttc
ttcgcaacgtatgccttgcactcgtcgatggagcagcagcaggcgctcgtcaccgcgctg
agagagaaggtgctcgagaatgtggcgagcgcgaagagaggatgggtggcggacgaagag
gagatggtggcaaaattggccaacgtcaatctgttcttgaaggtgcttgggctgcatagc
gatcagatcacgatctaa
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integrated database retrieval system