KEGG   Stereum hirsutum: STEHIDRAFT_121591
Entry
STEHIDRAFT_121591 CDS       T03127                                 
Name
(RefSeq) hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
shs  Stereum hirsutum
Pathway
shs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    STEHIDRAFT_121591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shs03019]
    STEHIDRAFT_121591
Messenger RNA biogenesis [BR:shs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     STEHIDRAFT_121591
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     STEHIDRAFT_121591
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 18796888
NCBI-ProteinID: XP_007304366
JGI: Stehi1_121591
LinkDB
Position
Unknown
AA seq 985 aa
MSFFGFEQNNDLQREKQDFAAGRKGDEDLAVYTWGEESYDGLGDVLQEGGDELNDETFGG
TGAIGKDFDFAQQALPSDDQLVSSAKFTENSGFIDQKLPGFFETASPGPGTPSLEGLSIS
EQGQQQPSRQPHSLWDERSPFSVLPRMNGTLRTQADLNRTTSSPRLGQYSNGSTPSTSQA
QAHVPSPGLSAAQLNPQGLVNQGGIRTLEEIEAEMRAAAQRTRTAAVATQRQQLLQEQQQ
QQQQYYQQQQRTAPPRMHPQSQSPRFHQQQQHQQLLLQQQREQQLLEQQLREQQILREQQ
IRDRDRQRQLQELQLQEQLRLEEIERQMRAARLQELQHQQQQQQQLLQGQYLSRGVTPQQ
ALALADMATQQQLERRRHRASPALIDSHMQVAYEQANGQLLPQNIQLQQRILSELAQAEF
LQNMQPSTEEDPNVVRAQVMRRIMETERMEEKRRLKAAKINHMSRYNDLMTQSDKDFITR
IQVSQLVTQDPYAEDFYAQVYGAIIRSRMGMQPSDDRVLKFGSGGGVGLGLGQKGSGRRP
NAMQKMEQQVERIVTNARLREKEKGMHSVHSLQGALGKTSGRSYKAAPRQLLQVEPGNAN
GNTSPAATHAHISREDAIRQEGEGAAKEAAKIGAAALGTADDSDGPIHRDPLTTREALIT
LESLYDLALNIEQIGREQPDDPEDFEAMGIWEAQLREMIQQLFEKLQVMAPLETSTPHPF
ISLITPAKGKKLLPRIYKHFDQQQMLTMLTLLVACFSQMDIVVHASLLDTPIPSQQQADI
ERQTQIFLGSVISTILPVVAKAGLRLVSGLLGLLLERNDIVAISQTKPGMAFLTLFLSRA
ELIKQNLATGVDMTDLPSPDEMQQWEHLFNHIFQLLLPHLPFLFPSTRLAMNIAALPPAE
QAQYAHQMQTDALDQPVWQFFATYALHSSMEQQQALVTALREKVLENVASAKRGWVADEE
EMVAKLANVNLFLKVLGLHSDQITI
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgtcgttcttcggattcgagcaaaacaacgatcttcaacgagaaaaacaggacttcgct
gcgggcaggaagggtgacgaagatctggcggtctatacatggggagaggaaagctatgac
ggactgggcgacgttttgcaggagggcggggacgagctgaacgatgagacatttggcggc
acgggggctatcggaaaggactttgattttgcgcagcaggctctgccttcggacgaccag
ctcgtctcttcagcgaaatttacagagaactccggcttcatcgaccaaaagttgcctggt
ttcttcgagacggcttcgcctgggcccggtaccccgagtctcgaaggcctatcaatctct
gagcaaggccagcagcaaccttcccgtcaacctcactcgctatgggacgaaagatctccg
ttctctgttcttcctcgtatgaatggcactcttcgtacacaggccgatctcaatcgcaca
acatcgtctccgcgtcttggccagtactcgaatggttcaaccccgtctacgagccaggcg
caagcccatgtaccctctcccggcctctctgcggcccagctgaatccccagggtctcgtc
aatcaaggtggaattcggactcttgaggagatcgaggcagagatgcgggctgcagctcaa
cggacacggaccgccgctgtcgccactcaacgtcaacaactccttcaagaacagcagcaa
cagcagcagcagtactatcagcagcaacaacgaaccgcccctccgcggatgcacccccag
tcccagtcgccccgtttccatcagcaacaacagcatcagcaacttctgctccaacagcaa
cgggagcaacaattgttggaacagcagttgcgggaacagcagatcttgcgggagcagcag
atcagagatcgcgacaggcagaggcagcttcaggagcttcagttgcaggaacagctgagg
ctggaggagatagagcggcagatgagggcggcgaggcttcaggagttgcagcaccaacag
cagcagcagcagcagcttttacaaggccagtatctgtcgagaggcgtgaccccacagcag
gctttggctctggcggatatggcgactcagcagcaactcgagcggaggagacaccgtgct
tcgcctgcgctgatcgattctcacatgcaagtcgcatacgagcaggccaatggtcagctt
cttccgcagaatatccagttgcagcagcggatattgtctgagcttgcgcaggccgagttc
ttacagaacatgcagccgtcgacggaggaagacccaaatgtggtgagggcccaggtgatg
aggaggatcatggagacggaaaggatggaagagaagaggagattgaaggcagcgaaaata
aaccatatgtcccgatacaacgatctgatgacccagtcagacaaggacttcatcactcgc
atccaagtttcgcaactcgtcacccaggacccgtacgcagaggacttctacgcacaagtc
tatggcgctatcatccgttctcgaatgggcatgcaaccttctgacgatcgtgtgctcaag
tttggatctggtgggggtgtcggactgggccttgggcagaaaggctccggcagacggccg
aatgcaatgcagaagatggagcagcaggtagagaggatcgtgacaaacgcaaggttgagg
gagaaggaaaagggcatgcactctgtacacagcctgcaaggtgctttgggaaagacgtcc
ggaaggagttacaaggccgctccgcgtcaacttctccaggtcgagccaggaaacgctaac
ggaaacaccagtcctgcggcgacccatgcgcatatttctcgtgaggacgccattcgccag
gagggtgaaggtgctgctaaggaagctgctaagatcggtgctgcggctctcggaaccgct
gacgattcggatggaccaattcacagggacccactcaccacgcgagaggctttgatcact
ctggagagcctttacgaccttgcactgaacatcgagcaaatcgggagagaacaaccagat
gatcccgaagacttcgaagctatgggcatctgggaagcacagctaagagaaatgatccag
cagctctttgagaagcttcaggtcatggccccgctcgagaccagcactccccatcctttc
atctccctcatcaccccggcgaagggcaaaaagcttctcccccgaatctacaaacacttc
gaccaacagcagatgctcaccatgctcaccctcctcgtcgcctgtttctcacaaatggac
atcgtcgtccatgcttccctccttgacacgcccattccgtcgcaacagcaagcggatatt
gagaggcagacccagatcttccttgggagtgtcatctcgactatattgcctgttgtggcg
aaggccggtttgagactcgtcagcggcttgttaggcttgctgttggagaggaacgatatc
gtggcaatctcgcagactaagcccgggatggccttcctgacacttttcctgagtcgggcc
gagctcatcaagcagaatcttgcaacaggagtcgatatgaccgaccttccatccccagat
gagatgcaacaatgggaacatctcttcaaccacatcttccagctcctgctcccacacctg
ccgttccttttcccgtctactcgcctcgccatgaatatcgccgcactcccacccgccgaa
caagcccaatacgcacaccaaatgcagaccgacgcgcttgaccagcccgtctggcagttc
ttcgcaacgtatgccttgcactcgtcgatggagcagcagcaggcgctcgtcaccgcgctg
agagagaaggtgctcgagaatgtggcgagcgcgaagagaggatgggtggcggacgaagag
gagatggtggcaaaattggccaacgtcaatctgttcttgaaggtgcttgggctgcatagc
gatcagatcacgatctaa

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