Stereum hirsutum: STEHIDRAFT_121631
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Entry
STEHIDRAFT_121631 CDS
T03127
Name
(RefSeq) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shs03016
]
STEHIDRAFT_121631
Enzymes [BR:
shs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
STEHIDRAFT_121631
Transfer RNA biogenesis [BR:
shs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STEHIDRAFT_121631
Prokaryotic type
STEHIDRAFT_121631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
18796898
NCBI-ProteinID:
XP_007304415
JGI:
Stehi1_121631
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MDPNQSTVPSKRPVETETCSTDPTPEPKRSRADSETHTPLSDAQPQQETALDTSQDLDIP
ASSSAPLDNSDASASIPPQLDSDATPVVPQSSTDPDAPKSKDGNKDKKRNDSGNQGQGKG
SGKSDKKKDKKSGKDPASHGWSRRGTRKEGEARPEGEEKAPRLPKRQCALLIGFCGTGCN
GMQIQPNVRTIEGVLFDALVRAGAVSKDNADDPVKVNLGRAARTDAGVHAAGNVVSIKII
TQIPGVPDVVAKVNELLPPEIRLWGYVRVQNSFNARLSCDSRKYTYFFPSYLLIPPKPGS
GLHKTLSAQASSPSTSPTPTSLFAHPFWSEQSSDEGNPSIKDEKEQDLKRKRTWRVGADM
MEKLRETARKFEATHNFHNFTVGREFGDRSTQRHMKKIEIADPAVYGETEWVSVMFHGQS
FMLHQVRKMMAALVLSVRTGTPAHVIDELYGPRDVFIPKMPSLGLLLEHPIFDSYNRKIT
AINANLDPSHAEYRPPIDFEAHKEAIDAFKQKHVYERMRDIEDRGGVFDAWIRAIDSYGG
NDLSYLNPKGTIPSSAVIKKNERRANPFRERKKFDTTDYAEKGKIEMEVEDAEGQDEEVE
EVFDKKKLMDMEG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggacccaaaccagtctactgtgccttcgaagaggcctgtagagactgagacgtgcagt
accgacccgactcctgagccgaaacgatccagagcagactctgaaactcatactcccttg
tccgacgctcagcctcagcaagaaacagctctagatacttcgcaggacctagatatacct
gcttcatcctctgcacccctggacaattcagatgcctctgcaagtatcccaccacagctg
gactctgacgccacaccagtcgtaccacaatcctccacagatcccgatgcacccaagagc
aaggatggcaacaaggataagaagcgtaatgattctgggaatcaaggtcaaggaaagggt
agtggaaagtcggataagaagaaggacaaaaaatcgggcaaggaccctgcgagtcacggc
tggagtcggaggggaacaaggaaagagggtgaggcgagaccggagggagaggagaaggct
ccgaggctgccgaagagacagtgtgcattgttgattggattttgtggaacaggttgtaat
gggatgcagattcaacccaacgtacgaaccattgaaggcgtgctatttgacgcgctcgta
cgcgcaggtgcggtgtccaaagacaatgcagacgatcctgtcaaagtcaatctaggtcgt
gcagcacgcactgacgcaggggtacacgctgccggaaatgtcgtctccattaaaatcatc
acccaaatacccggcgtcccagatgtcgtcgccaaagtcaatgagctcttacctccagaa
atccgtctatggggctacgtgcgcgtacagaactccttcaacgccagactgtcgtgcgat
agccggaagtatacctacttctttccttcatatctcctcatacctcccaagcccggctcc
ggactccacaaaacactatccgcgcaagcttcttccccttcaacttctccaacaccgacc
tcattatttgcacatccattctggtcagaacagtcttcggatgaaggcaacccgtcgata
aaggatgagaaggagcaggacctgaagcggaagaggacatggcgagtaggcgcagatatg
atggagaaattgagagagaccgcgaggaagttcgaggccacgcataatttccacaatttc
acggttggaagggaatttggggataggagcacgcagaggcatatgaagaaaatcgagatc
gcggatcctgcggtgtacggcgagacggagtgggttagcgttatgttccacggtcagagt
ttcatgctccaccaggttcgtaagatgatggctgctctggtcttgtcggtgcgcacaggc
actccagcgcacgtcattgacgagctctatgggccccgcgacgtattcatcccaaaaatg
ccctcgctcggccttctgctcgaacaccccatctttgactcgtacaaccgcaagatcacc
gcaatcaacgcgaaccttgacccctcccacgcagagtatcgtccaccaatcgatttcgaa
gcacataaggaggcgatcgatgcgtttaagcaaaaacatgtatatgagcggatgagggac
atcgaggatcgtggcggggtattcgatgcctggatccgtgccattgactcgtatggcggg
aacgatctctcgtacttgaatcccaagggaactatcccctcgagcgcggtcatcaagaag
aacgagaggcgggcaaatcctttcagggagcggaagaagttcgatacgacggattatgcg
gagaaggggaagatcgagatggaggtggaggatgcggaggggcaggacgaggaggtggaa
gaggtgtttgataagaagaagttgatggatatggagggttga
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