KEGG   Stereum hirsutum: STEHIDRAFT_121882
Entry
STEHIDRAFT_121882 CDS       T03127                                 
Name
(RefSeq) hypothetical protein
  KO
K10610  DNA damage-binding protein 1
Organism
shs  Stereum hirsutum
Pathway
shs03420  Nucleotide excision repair
shs04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    STEHIDRAFT_121882
  09124 Replication and repair
   03420 Nucleotide excision repair
    STEHIDRAFT_121882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shs04121]
    STEHIDRAFT_121882
   03400 DNA repair and recombination proteins [BR:shs03400]
    STEHIDRAFT_121882
Ubiquitin system [BR:shs04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     STEHIDRAFT_121882
DNA repair and recombination proteins [BR:shs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      STEHIDRAFT_121882
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      STEHIDRAFT_121882
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st
Other DBs
NCBI-GeneID: 18796941
NCBI-ProteinID: XP_007304809
JGI: Stehi1_121882
LinkDB
Position
Unknown
AA seq 1255 aa
MKVVTTFHQPSSVAHSLKCTLSPDQLHLVVAKLNTLEVYSAQPEGLRHECTAELYGRISV
IRTITRKDDPDNILLMTDHPAPKLVVLSPKWISNRLSLVTVQTESLYEQIARPSEFVHNV
FLDPYGYVGLAHCYTGKAKAFTINDGLLEDFCDVLVPELNILSLTLVSSPEQAIDTPDPS
ALAILHLDHRQNIQLLLRDLNISEYELSPSPSLMFTPATISSKVFEMAPVPENPPIIVNI
PPLQLPNPEAMEGTSDFNGGLLVIGGKKLLLFELTSKEFQRKHHKRLRKQESRRSTSGKD
KAKAEPKEEKEGKSRSKPIASVAWPWSEVTACCQANDEGTRYLVGDAYGRLAMLSLDSLY
DQGLILIPLGETSPATTLTYLDSQFLYVGSHFGDSQLIKIHRQPYGYTNTDTLPLLGILP
LEPTNLASSSGKGKAKAAAGRKSDGRILGMKGKYLEVVHSWRNIAPILDAVKADTDGSGL
PHIVTCSGGKSTGSLRVIRNGADFQEKAVVDGLDNMTGLWALRSHNSDKDHSYLVASDKD
ETHLFRFEGPESLRRVESSSESYFRMNKPTLAVANVGDLDSSLILQVTSDKVQLLEFDAV
LEIFHLSSHWSPESGKQITLASISPTQVLLALDGGTVVLLGLDKSRNMTVLSTRLYNAEI
SALSCALPNALGAVSFWDSDRIELVSLGGSTPLLSTVTSREIGSSARARSILLHKFDSTS
SEMQLLVGLTNGIMVAFVVASSETKTPELQDRKTFAMGNMPVLLVKVMVDGHTSVLASGS
RSVVVFWEKGRLKTSPVMLNNIFAGAPVDTPWSPSSVVLATGSKLIIGSVHGLDKMHIVP
VTATPFGLDNPRRIVYDSHASVFAVACTRIEPAPVFGEEVSRGSFKLLDDITFELIGEVP
FAENTDQMQEITAIHAFQHVEGNIAISHYCVGLVTYQLDEKEPSHGELHIFSKGGTEPDG
TVKADLLEVVKQEVSGCVYALASFEGYIVAAINSTVSFFKLDTSGTEATLVKKHEWNHNY
LVTSLVVSGSYLLIGDAISSVSVLQVIQVDENGEITEKLKTVARDYGPLWPVSLQGWGKE
GVIGANSDCNLFSFTLQPVTPQKTVLDRDGHFHLDDHVNKFLHGTVHSSEKAEDLDIEAR
SLFFTASGRIGLVLDMGKELSLHMTALQRNLNGVVKDVSGTTHKRWRAPVSGRGPSDADA
EAYGFLDGDFIEQFLNYDELSPEMKRIMEGSSDPERLELSHRQILHTLETLQSMH
NT seq 3768 nt   +upstreamnt  +downstreamnt
atgaaggtcgtcaccacctttcatcagccatcttctgtcgctcattctctcaaatgcacc
cttagccccgaccaactccacctggttgttgccaaactaaacacccttgaggtctattca
gctcagcctgaaggacttagacatgaatgcactgctgaattatatggccgtatctctgtc
attcgaactatcacgagaaaagatgacccggacaatatcctgcttatgacggaccatcca
gcccctaaactcgtcgtattatctccgaaatggattagcaatcgactgtccttggttact
gttcagacagaatctctctatgagcagatcgctcgaccgtctgagtttgtgcacaacgta
ttcctcgacccatacggctatgtcggtctcgcacactgctacacaggcaaggccaaggcc
ttcacgatcaacgatggtctgttagaggacttctgtgatgtcttggtccctgaactcaac
atcctatctctcactctggtatcctctccagaacaagcaatcgacacaccagatccatca
gcccttgccatcctgcacctcgatcaccgccaaaacatccagcttctcctccgcgatctc
aacatctcggagtacgagctttctccttctccatccctcatgttcactcccgccacaata
tcttccaaagtcttcgagatggcccctgtcccggagaatccccccatcatcgtcaatatc
ccacctctacagctcccaaaccccgaagctatggaaggcacgtcagatttcaatggggga
ctgttggtcataggcgggaagaagctactgctcttcgagctgacaagcaaagagttccaa
agaaagcaccacaagagactgaggaagcaggaaagtaggcgaagtacatctgggaaggat
aaggcgaaagcggagccgaaagaggaaaaggaaggaaagtcgcggtcaaaaccgatagct
agtgtagcatggccatggagtgaagtcactgcatgctgtcaggcgaatgacgaaggcacg
cggtatctcgtaggagatgcatatggccggcttgctatgctttcccttgattcgctatac
gaccaaggcttgatccttattcctttaggcgagacatctccagccacgacgctaacgtac
ctcgattcccaattcctttatgttggctcgcactttggcgattctcagctcatcaagatc
catcgacaaccctacggctacaccaacactgacacgcttccacttctcggtatactccca
ctcgaacctaccaatctggcctcctcctccggcaaaggaaaggcaaaggcggcagctgga
agaaagtcagatggacgcattctgggaatgaaaggaaaatacctcgaagtcgttcactca
tggaggaatattgcacccatcttggacgccgtcaaagcggatacagacggcagcggattg
cctcacattgtcacatgttcaggcggcaagagtactggcagtctcagggtcattcggaac
ggagcagatttccaagagaaagctgtcgtcgacggcctggataatatgacaggtttatgg
gcactgcgatcgcataacagtgacaaagatcactcatacctggtagcaagtgacaaagat
gagacacacctcttccgcttcgaagggccagaaagtctacgccgtgtggagtcgtcctcc
gaatcttatttccgcatgaacaaaccgacattagccgtggcgaatgtgggcgacctggat
tcatcgctcatcttgcaggttacttctgacaaggtacaactgttggagtttgatgccgtc
ctggagatattccatctatctagtcattggtcaccagaaagcggcaagcaaatcacgcta
gcatcaataagtcctacgcaagtccttctggccctcgatggtggtacagtggtgttactg
ggcctggacaaaagccggaatatgactgtgctctcgactcgactatataacgccgaaata
tccgccctctcttgtgcactacctaacgctcttggtgccgtctccttctgggactcagac
cggatcgaactcgtatcgctcggaggctcaacaccgcttttatccaccgtcacctccaga
gagatcggctcgtctgcccgcgcccgctccatcttgctacacaaattcgactccacctcg
agcgagatgcagcttctcgtcggcctgaccaacgggatcatggtagcctttgtcgtagca
tcttcagaaacgaagaccccagaactccaggatcgcaagacatttgcgatgggtaatatg
cctgttctgcttgtgaaagtgatggtcgatggacatacgtcggttttggcgtccggaagc
cgctcggtcgttgtcttctgggagaagggaaggctgaagacctcaccggtcatgctcaat
aatatcttcgcgggcgcgccggtcgacacgccgtggtcaccatcatccgtagttctcgcc
accggatccaaactgatcatcggcagcgtccatggactcgataaaatgcacattgtccct
gtcactgccacaccattcggtctcgataacccacgacgcatcgtgtacgattcccacgcg
tctgtattcgctgttgcctgtacacggattgaaccagcacctgtgtttggagaggaggta
tcaaggggaagcttcaagctcttggacgacatcacattcgaactcattggcgaggtacca
tttgcagaaaatacagaccaaatgcaggagatcacggccatccacgcattccagcacgtc
gaaggcaacatcgccatttctcactattgcgttggattggtgacgtatcagctggacgag
aaggagccaagtcatggcgagctgcatatcttctcgaaaggaggaacagaaccggacggg
acggtgaaagccgatctgcttgaggtggtcaagcaggaagtgagcggttgtgtgtatgcg
ttggcgtcgtttgagggatatatcgtagctgcgatcaactctaccgtgagcttcttcaag
ttggatacgagtgggaccgaagccacgctggttaaaaagcacgaatggaaccacaactac
ctcgtcacaagcctcgtagtctctgggtcatatctgctcatcggagacgcgatcagctcg
gtctccgtcctccaggttatacaggtagatgagaacggagaaattactgagaaattgaag
accgtggcgagggactatggaccgctctggcctgtatctctgcaaggatggggaaaggag
ggcgttataggcgcaaacagcgattgcaacttgttctctttcacgctccagcctgtcaca
ccacagaagaccgtattagaccgtgatggtcacttccacttagatgaccacgtcaataag
ttcttgcatggaacagttcactcgtcggagaaggccgaagacctggatattgaagcgaga
tcgctattcttcactgcctcgggacgaataggccttgtcctagacatgggcaaggagctc
tcactgcatatgaccgcattgcagcggaaccttaacggagtggtcaaggacgtgagcggt
acgacccataaacgatggcgtgcgccagtgagcggccgtgggccaagcgacgccgacgca
gaagcgtacgggtttttggacggcgacttcatcgagcagttcctcaactacgacgagctc
tcgccggaaatgaagcgtattatggagggcagtagtgatccggagaggttggaattgagt
catcgtcagatcctgcatacgttggagacgttgcagagtatgcattag

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