Stereum hirsutum: STEHIDRAFT_128044
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Entry
STEHIDRAFT_128044 CDS
T03127
Name
(RefSeq) UvrD-helicase-domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shs
Stereum hirsutum
Pathway
shs03420
Nucleotide excision repair
shs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
STEHIDRAFT_128044
03430 Mismatch repair
STEHIDRAFT_128044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_128044
Enzymes [BR:
shs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STEHIDRAFT_128044
DNA repair and recombination proteins [BR:
shs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
STEHIDRAFT_128044
MMR (mismatch excision repair)
Other MMR factors
STEHIDRAFT_128044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-GeneID:
18797910
NCBI-ProteinID:
XP_007299863
JGI:
Stehi1_128044
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MVDYITASLNPSQEKAVRHCPDIPLQILAGPGSGKTKVLTSRIAHLILHHRIPPSAICAV
TFTNKAANEMKERLSKLIGRDWTYQIKMGTFHALCALFLRRHGTLAGVDSNFTICDADES
EKLITKLVKPRLEEWEAKGITVKAKTVMSVISKAKAQGHNPQQYLRFSVAKDGIIPPNPP
PPDPLTVMFAEVYTDYQKTLRKSNSLDFDDLLVYGVKLFRGHDKVVSWCRHVLVDEFQDT
NTMQYAIMKHLATHHTSVTVVGDPDQSIYGWRSADVANLKKMQKDFSTTEQIFLEENYRS
TASILAVSLAIVSKDKTRIPKSLHTSHPHGTIPMLGTFRDEKMEAQFIATETKRLVAASG
GMFEWKDFVILLRFNALSRALEAALQKEGIPNRVLNGHKFFERIEIKDLLAYLQTVDNPL
FVPAFVRCINTPPRTIGEKSVNEILARAEKDKISPLTLLEGIYDSKMPDIKPAVKRKIGS
FVPTIRKLRKLANSGTPPADLIRELLELTAYEGYLKKLFPDWETRWENVQELITFAAQPQ
ETIRMDLDAVEVPQASQSQDQSQSQEQDNIEMYDLEQDGFMVVDEPASEVKGKEKEKPVT
TPPKTEQGLLETPLRTFLQASMLSTDSETREDGDKNKVTISTCHAAKGLEWPVVFVPAVE
KDIFPFYRTEDTEEERRLLYVACTRAQGLLYISNVVGRMHGGKVKFTQVSEFISAVLKDD
LTLTTTQPPAMNYPEVEVISRVLRQPCPSIEDINKRMRE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactatatcacagcgtcattgaacccatcacaagagaaagccgtccgtcactgt
ccggacatcccacttcagattttggctggtccaggaagtggaaagaccaaagttctcaca
tcgcgaatcgcacacctcattcttcatcatcgtattcctccctcagcgatatgcgccgta
acgttcaccaacaaggctgcaaacgagatgaaggaacgactttcaaaactaataggcagg
gactggacctaccagatcaagatgggaacattccatgcgctctgcgctctcttcttgcgg
cgacatggcacgttggctggagttgactccaatttcacgatctgtgatgctgacgaaagt
gagaagctgatcacgaagttggtcaagccccggctagaggaatgggaagcaaaggggatc
acggtcaaggcgaagaccgtcatgtccgtcatttctaaagccaaagcccaaggccataat
ccacaacagtaccttcgattctctgtcgcgaaggacggcataataccgcccaatccaccg
cctcccgatcccctcacagtcatgttcgctgaggtctacacggactaccaaaagacgttg
aggaaaagcaacagcctcgacttcgatgacctcctcgtatatggtgtgaaactattcagg
ggccacgacaaagtggtctcgtggtgtcgccatgtacttgttgatgaatttcaagatacg
aacacaatgcagtacgcaatcatgaagcatcttgcgacccaccacacctccgttaccgtc
gtgggcgatccagatcaatccatctacggctggcgttcagcggacgtggccaatctgaag
aagatgcaaaaagacttttccacaacggaacagatttttctggaagaaaactacagatca
acagcttccattcttgctgtaagcctggctattgtctcgaaagacaaaacacgtataccc
aagtctctacatacatcacatccacacgggaccatcccaatgctaggtacatttcgcgac
gagaagatggaggctcagttcatcgccacggaaaccaagcgtcttgttgcagcaagcggc
ggcatgtttgaatggaaggattttgttatcctgttgcgttttaatgcgctctctcgcgcc
ctcgaagctgctctacaaaaggaaggcatccccaaccgagttttgaacggacataaattc
tttgaacggattgagatcaaggacctcttggcttatctccagactgtcgacaatcccctc
ttcgtccctgctttcgttcggtgcataaacacacctccacgcaccattggcgaaaagtcc
gtgaacgagatacttgccagagcagaaaaggacaagatttcgccactgactctccttgag
ggcatatacgatagcaaaatgccagacatcaaacccgctgtaaagcgcaagatagggagt
ttcgtgccgaccattcggaagcttcgcaagctcgctaactcgggaacgcccccagcagac
ctcatacgcgagctgctcgagctcacagcttacgaaggatacctcaagaagctatttccg
gactgggagacccgatgggagaacgtccaggagttgatcaccttcgcagctcaacctcag
gaaaccatacgcatggatctcgacgcagtggaagtgccacaagcatctcagtcacaggac
caatctcaatcgcaagaacaggacaacatcgagatgtatgatcttgagcaagatggcttt
atggttgtcgatgagcctgcgagcgaagtcaaaggaaaggagaaggagaagcccgttact
acacctcccaaaactgaacaaggactactcgagaccccgctgcgcactttcctgcaagcg
tctatgctgtcaactgactcagagaccagagaagacggtgacaagaataaagtcacaatc
tcgacatgccacgcagcgaagggactggaatggcctgtcgttttcgttcccgcagtcgag
aaagacatctttcccttttaccgaacggaggatactgaagaagaacggcgtcttctgtac
gtggcatgtaccagggcgcaaggtctgctgtacatttccaacgtggtaggccgtatgcac
ggaggcaaggtcaagttcacacaagtctcggaattcatatccgccgtgctcaaagatgac
cttaccttgacgacgacccagcctccagcgatgaactacccggaagtcgaggtcatctcg
cgtgtgcttcgacaaccatgtccttcgatagaagatatcaacaagagaatgcgcgaatag
DBGET
integrated database retrieval system
