Stereum hirsutum: STEHIDRAFT_129160
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Entry
STEHIDRAFT_129160 CDS
T03127
Name
(RefSeq) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shs03016
]
STEHIDRAFT_129160
Enzymes [BR:
shs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STEHIDRAFT_129160
Transfer RNA biogenesis [BR:
shs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STEHIDRAFT_129160
Prokaryotic type
STEHIDRAFT_129160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
18797987
NCBI-ProteinID:
XP_007301288
JGI:
Stehi1_129160
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MPKASTSSASLPISGLFGLNKPSGPTSMHIVNQLKIVMSRSPLFFEPEKVEAGKGKQKGR
RRRGKDMLKIGQGGTLDPLADGVLVIGVGKATKKLNDFLDCAKEYTATCLLGCETDSYDS
EGVRVRTAPWRHVTKEAVEQTLSQFTGEIEQTPPIFSALKMDGMPLYDYARKGIPLPRPI
EKRKITVHSLELIEWKGQDHPYRWPEKKFTGEQQKALEKMLSGVKKEVKVEDQGEDVGEN
EVPNAFVLKMKVSGGTYVRSIVHDLGHALGSAGHVVTLTRLRQKNYVLDGATPEEGDHKC
VEWEIIEKALDDEGERDADGRTLWEREVLDKIAVVESNEAKN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagccagcacgtcctccgcctctctgcctatctccggtctctttggtcttaat
aagccatcgggtcctacatccatgcacatcgtgaatcagctgaaaattgtcatgtcgaga
tcaccgctcttcttcgagccggagaaggtggaagcggggaaaggcaaacagaagggcagg
aggaggcgtggaaaggatatgttgaagattggccagggagggacgctcgatcctttagcg
gatggtgtgctcgtcatcggggtaggtaaagcgactaagaaattgaatgatttcttggat
tgtgcgaaggagtataccgcaacttgcttgttaggttgtgagactgactcgtacgatagt
gaaggcgtacgggttcgtactgcgccttggcgacatgtgaccaaggaagccgtagagcag
accttatcgcaatttactggagagatcgaacagacacccccaatcttctccgccctgaaa
atggatgggatgccattgtacgattatgcacgtaaaggcattccgcttcctcgccccatc
gagaaacgcaaaatcacagtccactctctggagttgatcgaatggaaaggccaagaccat
ccttaccgctggcccgagaagaagttcacaggcgaacagcaaaaggccctggaaaagatg
ctttccggcgttaagaaggaggtcaaagtcgaggaccagggcgaagacgtaggagagaac
gaagttccgaacgcttttgtgttgaagatgaaggtctccggtggtacgtatgtcagatcc
atcgtgcacgatttgggtcacgccctaggctcggcgggccacgtcgtcaccctcacccgt
ttgaggcagaagaactatgtgttggacggagcaacgccggaagagggcgaccataagtgt
gtggagtgggagataattgagaaagcgttggacgatgaaggcgaacgcgacgcagatgga
aggacactgtgggagagagaagttctagataaaatcgcagtagtagaaagtaacgaagcg
aagaattag
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