Stereum hirsutum: STEHIDRAFT_129408
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Entry
STEHIDRAFT_129408 CDS
T03127
Name
(RefSeq) DEAD-domain-containing protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_129408
Enzymes [BR:
shs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STEHIDRAFT_129408
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
Pre-60S particles
Helicases
STEHIDRAFT_129408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18798005
NCBI-ProteinID:
XP_007301730
JGI:
Stehi1_129408
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MQGRDVIGVAETGSGKTLAYGLPILSRLLTAATSSSPPSHLSTSLSSTSTSSPSPPSLPP
AHSVIKNKNTNVKQENTTGRKTQKKKTRRPLRALILAPTRELALQVSAHLNGCLNGVYQS
SSNSGEGVGIKVEDEDGEGGVPEQGEGKDVKGGKSNGKAGGGKKGKVSGNGKGKGKETTK
AKAPPLVSVAAIVGGMSAQKQKRVLERGVDVLVATPGRLWDVVEEDPTLAEDIKHLHFLV
LDEADRMIETGHFKELDGLLRLTRREFQKETTEADFDFSLSAQTKGQHGAEFDSDCEEQN
GEAGPQSGKQDGKGEGEGVNDTMQTFVFSATLSKDLQRNLKKRGWGGGGAGGTGGRKGKE
VASTLDELLQRLDFRDPEPEVVDLSPEGGVVETLKECKIECLMTEKDIYLYYFLLRYPGR
TLVFLASVDGIRRMLPLFEFLGLPVWPLHSQMEQRQRLKNLDRFKSNHHAVLLATDIASR
GLDIPSVDHVVHYQIPRTADAYVHRNGRTARASRKGFGMLMCAPDERRVMRGVLGSLGRE
ESSIPEMTIEHHLLDKLKPRLQLARQIENAQHKEKKEKHEKNWLKEMAEAMDVDLDESLG
GGDDDAPSNPMSQRLKAKTAKLNAMKAELKRLLAQPLVARGVSTKYITSGSRPIVDDIVR
GEYHEGMVGVKKAEAGDDLMAVKKGKGKDKKKEKAKKGKGVKKEEDHGDGDDGEEWTGFG
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggagagatgttattggtgttgcggagactggctccggaaaaaccctagcctac
ggtctccccatcctctctcgtctcctcacagccgctacctcttcctctcccccctctcat
ctttccacttccctttcttccacttccacttcctctccatctcccccctctctccctccc
gcccactccgtcatcaaaaacaaaaacacgaacgtcaagcaagaaaacacgacaggaagg
aaaactcaaaagaaaaagacgagaagacccctccgcgcactcatactcgccccgacgcgc
gaactcgcattacaggtttcggcgcatttgaatgggtgtttgaatggggtttatcagtct
agttctaattctggggagggcgtcggaatcaaagtggaggatgaggatggagaggggggc
gttcctgaacagggggaggggaaggacgtgaagggcgggaaatccaacggtaaagccgga
ggcgggaagaagggtaaggtgagtggaaacgggaagggcaagggtaaagaaacgacgaaa
gccaaggcacccccgctcgtgagcgtagcggccatcgtgggcggcatgtcggcgcagaaa
cagaagagggtgttggagaggggtgtggacgtgttggttgcgacgccggggaggttgtgg
gatgttgttgaggaggaccccaccctcgccgaagacatcaaacacctgcatttcctcgtg
ctcgacgaagcggacaggatgatcgagacgggccattttaaggagcttgacgggttgttg
aggctgacgaggagggagtttcagaaagaaacgacggaagccgatttcgacttcagcctg
tccgctcagacgaagggacagcatggcgctgaattcgactccgactgcgaggaacaaaac
ggagaagcaggaccccagagcggaaaacaagatgggaaaggagagggcgaaggcgtgaac
gacacgatgcagaccttcgttttctccgcgacgttgagtaaggaccttcagcggaacttg
aagaagaggggctggggtggtgggggtgccggtggaacgggtggaaggaaggggaaggag
gtggcgtcgacgttggacgaactcctacagagactcgactttcgcgatccggagccggag
gtcgtcgatctcagtccggagggcggggtcgtggagacgttgaaggagtgtaagatcgag
tgtttgatgactgagaaggacatctacctctactatttcctcctccgctaccccggccgg
acgctcgtcttcctggcgagcgtggacgggataaggaggatgctgccgctgtttgagttc
ttggggctgccggtgtggccgttgcattcgcagatggagcagaggcagaggttaaagaat
ctggatcgcttcaaatcaaaccaccacgccgtcctcctcgccacagacatcgcctcccgc
ggcctcgacatcccttccgtagaccacgtagtgcactaccagatcccacgcacggccgac
gcgtacgtgcaccggaacggaaggacggcaagggcgagcaggaaggggttcggcatgttg
atgtgtgcaccggacgagaggagggtgatgaggggggttttggggagtttgggacgagag
gagtcctcgatcccagaaatgacgatcgagcatcacctcctcgataaactcaagccgcgg
ctgcagcttgcgagacagatagagaacgcgcagcataaggagaagaaggagaagcacgag
aagaattggttgaaggagatggcggaggcgatggatgtcgatttggatgagagtttgggc
ggcggggacgatgacgccccctcaaacccgatgtcacaacgactcaaggccaaaaccgcg
aaattaaacgctatgaaggccgagctgaagaggttgctcgcgcaaccgctcgtcgcgagg
ggcgtgtcgacgaaatatatcacgagtgggagtaggccgatcgtggatgatatcgtcaga
ggggaatatcatgaagggatggttggcgtgaagaaagcggaggcgggtgacgatctgatg
gcggtgaagaagggtaagggtaaggacaagaagaaggaaaaggcgaagaaggggaaaggt
gtgaagaaagaggaggaccatggagatggcgacgatggggaggagtggactggctttggg
tcatga
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