KEGG   Stereum hirsutum: STEHIDRAFT_130700
Entry
STEHIDRAFT_130700 CDS       T03127                                 
Name
(RefSeq) hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
shs  Stereum hirsutum
Pathway
shs03020  RNA polymerase
shs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shs00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    STEHIDRAFT_130700
  09124 Replication and repair
   03420 Nucleotide excision repair
    STEHIDRAFT_130700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shs03021]
    STEHIDRAFT_130700
   03400 DNA repair and recombination proteins [BR:shs03400]
    STEHIDRAFT_130700
Transcription machinery [BR:shs03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     STEHIDRAFT_130700
DNA repair and recombination proteins [BR:shs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      STEHIDRAFT_130700
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Cas12f1-like_TNB Zn_ribbon_recom Lar_restr_allev DpnI DUF7351 Zn_ribbon_Elf1 Zn_Ribbon_YjdM DUF7479 zf_Tbcl_2 Zn_ribbon_PaaD
Other DBs
NCBI-GeneID: 18798088
NCBI-ProteinID: XP_007303531
JGI: Stehi1_130700
LinkDB
Position
Unknown
AA seq 128 aa
MASLHFCGECNNLLYPKADQQRRTMVYACRICTHSEVGDNSCVYRNDLLTVTKEQVGVTN
DLGVDPSLAHSNMTCPKCGHEDAVFFQDQSKRKETRMILFFVCTKCNNSFMDPSLAEGGA
IPDDIEQS
NT seq 387 nt   +upstreamnt  +downstreamnt
atggcctcgcttcacttttgcggtgaatgcaacaaccttctttatcccaaagccgatcag
cagcgcagaacaatggtctacgcatgtcggatatgcacacattccgaagtcggggataat
agctgcgtgtacagaaacgacttgcttacggtcacaaaggagcaagttggtgtaacaaat
gatcttggcgtcgacccttcattggcccattcgaacatgacatgcccgaaatgcggtcac
gaagacgccgttttctttcaagatcaatctaagcggaaagagacgagaatgatcctgttc
tttgtatgcacgaaatgtaacaacagtttcatggacccgagcttggcagaaggaggagcc
atcccggacgatatcgagcagagctag

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