Stereum hirsutum: STEHIDRAFT_133763
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Entry
STEHIDRAFT_133763 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
shs
Stereum hirsutum
Pathway
shs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STEHIDRAFT_133763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_133763
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
STEHIDRAFT_133763
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF2439
Motif
Other DBs
NCBI-GeneID:
18798313
NCBI-ProteinID:
XP_007308146
JGI:
Stehi1_133763
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MPPFLPPSTSGVYVGQKRNSDGIASEYPRSKRHATDNVATAAPHAGAAHGSGERYWNVQW
RVPQARKHKTWEGDGVLLVNGTTGSLFDSDGKLCAWSTKSEPLTDGSEFPFGNKDILIDC
PLSRAEFLSGRCFGRNTAVFSAVEEMQKPRTSEKKFVPFKPSSKASSSEDKALESYWAVN
WRKHQQKKHKTWDGDAWLVHRGDKLTLISESGKILGSKTWEGGKPSRGYQTHIGGREIQI
DNEVKRSSIPSITGTSPESQNDDVEFVDPSTTPRKASFLAKAQADQPTRSPIRNSPSSVQ
KYVPPKSFYGTLPPKLKPKGPLHDPDAEGAVVMKAPTEEHMTKYNKKYSLPNSPVVPVVI
DPVLARRLRPHQVEGVKFMYESVMGLRKHEGNGCILADEMFTIRWPLTSTPLEQNPYIDR
GPVVGKVLIVCPVTLINNWKNEFHKWLGRDRVGIFVGDKDKSAIKQFINSKIHHVLIVGY
ERLRSVMYAPILPPIGLIIADEGHRLKSADNKTSKMFEALKTPRRVILSGTPVQNSLREY
FAMADFCNPGLLDDYNTFRRVYETPILRSRTPGCTKKEQELGEARSAQLQAISRSFVLRR
EAGILKNYLPPKRKYCIYERRQPRLRHSAILLDEYIVFVTPTLLQLSIFSKILNPDKLDN
IIQSSTAESLALINMLTKISNSPILLKAVADKAKAKAKGEGNIAKTSAVEEAVKLLPNGA
QVHDVSLSGNFDNTMLNDPPQRTDEKCIVVSHYTSTLNILEEFCKKKSYTFLRLDGQTPA
GKRQELVNTFNKSSQERCFMFLLSSKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMARIH
RDGQRREVFIYRFMTAGTIDEKIFQRQTTKLGLSTLIGNTKSESKSDSFTPKELRDIFTI
HPHTSCHTHELLDCPCDQSDNIDPFERSMSDGGGEVSGVPKGFVNASQVKPEEVPLIDKA
YKKKKKAELAALGEWTHINCLRPDAITKIQDELLRTLIFSPKPLPGSASTSNPPTGGTTS
RIDSLLAAVDIDNVAQLDLAALTVDDVPGGTLSFLFEKNSKVDEEDEEAVPDSSTGEEGE
DEDDDEAAANSVDEEEEEEDVE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgtttcttcctccgtctacctctggagtatacgttggccagaaacgcaacagc
gatggcatagcctcggagtacccacgttcgaagaggcatgcaaccgataatgtcgcaacg
gctgctccacatgcaggggcagcgcatggtagcggtgaacggtattggaatgttcaatgg
agagttccgcaagctcggaagcataagacatgggaaggcgatggagtattgttggtcaat
gggacaaccggatccctcttcgactctgacggcaaattgtgcgcatggagtaccaaatca
gaacctctcactgacggcagcgagttccccttcggcaacaaggacattctcatcgattgt
cctctttcgcgtgcagaatttctttctggacgatgctttgggcgcaacaccgccgtcttc
tctgctgttgaggaaatgcaaaagccccgcacttctgagaagaaattcgtccccttcaag
ccttcttctaaggcttcaagctccgaggataaagctttggagtcttactgggccgtgaac
tggcgaaagcaccagcagaagaagcacaagacctgggacggggatgcctggctcgtccac
cgaggggataaacttacattgatatcagaaagtggcaagatcctcggttccaagacctgg
gaaggcggcaagccaagtcgtggctaccaaactcatattggtggtcgtgagatacaaatc
gacaacgaggtcaagcgatcaagcatcccatctatcaccggcacgtcacctgaatcccag
aacgacgatgtggaatttgtggatccttctacgacccccagaaaggcctcgttccttgcg
aaagcacaagctgaccagccaacgcgctcgccgatccggaattcaccgtcgtctgtccag
aaatatgtacctcccaaatcgttctatggaacgctcccaccgaaactgaaacctaaggga
cctctgcatgatcctgatgctgaaggggccgttgtgatgaaggcgccaacagaggaacac
atgacgaaatacaacaagaagtactcccttccaaattcccccgtcgttcccgtcgtcatc
gatcccgttctggctcgtcgtctacggccacaccaggtcgaaggcgtcaagttcatgtat
gagtctgttatgggcctacgtaaacatgaagggaacggttgcattcttgcagacgaaatg
ttcactattcgttggccgttgacatctacgccactagagcaaaatccctacattgatagg
ggtcctgtcgtgggcaaggtcctcatcgtttgtcctgtgaccctcatcaacaattggaag
aacgagtttcacaagtggctagggagagacagagttggaatcttcgtgggagacaaggat
aaaagtgccatcaaacagtttatcaactcgaaaatccaccatgttctcattgtgggttac
gagcgcctacgaagtgttatgtacgcccccattttgccaccaatcgggctcattattgcg
gatgaaggacatcggctcaaatcagcggacaacaagacttccaaaatgtttgaagccttg
aagacgccaaggagagtgattttgtctggaacgccagtgcagaactctcttcgtgaatat
tttgccatggcggacttctgcaaccctgggctactagatgactataacaccttccggcgc
gtctatgagacccctatcttgcgtagtaggacgccaggttgcaccaagaaggaacaggag
cttggtgaagctcggtcggcccagttgcaagctatttcccgcagcttcgtccttcggaga
gaggctgggattctgaagaattatctacccccgaaacgtaagtactgtatttatgagcgt
cggcaaccgagactgaggcattcggcgatccttttagatgaatatattgttttcgtgacg
ccgacgctgttacaactttccatcttctccaaaattctcaacccggacaaactggacaat
atcatccagagctcgaccgccgagtctctagcccttatcaacatgctcaccaagatcagt
aacagccccatcctcctcaaggctgtagccgacaaggcgaaggctaaggcgaaaggcgaa
ggcaacatagccaaaacttccgccgtggaagaggccgtcaaactgcttcccaatggggca
caagtccacgatgtgtcattgagtggtaacttcgataataccatgcttaacgatccccct
cagcgaacggacgagaagtgtattgttgtctcccactatacgtccacgttgaacatcttg
gaagagttctgcaagaagaagtcttacactttcctgcggctagatggtcaaaccccagca
ggaaagcggcaagaacttgttaacaccttcaacaagtcgtcacaagagcgctgcttcatg
ttccttctgagttccaaagcagggggcgtaggcctcaacctcatcggtgcttcgagacta
tgcctcatcgactcggactggaacccgagtcacgaccttcaatcgatggcgagaatccac
cgagatggccaacggcgtgaagtgttcatatatcgcttcatgactgcggggaccatcgat
gaaaagattttccagcgtcagacgacgaaacttggtctgagcacgcttatcggcaatacc
aagtcggaatctaagtcagattcattcaccccgaaggaattacgagatattttcactatc
catccgcacacatcctgccacacgcatgagctccttgattgtccatgcgaccaatccgac
aacatcgatcccttcgaacgttcgatgtccgacgggggcggtgaggtctctggagttcca
aagggtttcgtgaacgcatcccaggtgaagcctgaagaggtgccacttatcgacaaggcc
tacaagaagaagaagaaagcagagctcgccgcgctcggtgaatggactcacatcaactgt
ttacgcccagacgcgataaccaagatccaagacgagctgctgaggacgcttatattttcg
ccgaaacctttaccaggctcggcttcgacttcgaaccctccgactggaggtacaaccagt
aggatcgattccctcctagccgccgtcgacatcgacaatgtcgcccagttggatctcgcg
gctttgacggttgatgatgttcctggtggtactttgtccttcctctttgaaaagaactcc
aaggtagatgaggaagacgaggaggctgttccagacagtagtacgggcgaggaaggcgag
gacgaagacgatgacgaggctgctgcgaacagtgtggatgaagaagaggaagaagaagac
gtggagtag
DBGET
integrated database retrieval system
