Stereum hirsutum: STEHIDRAFT_134801
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Entry
STEHIDRAFT_134801 CDS
T03127
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
shs
Stereum hirsutum
Pathway
shs03018
RNA degradation
shs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
STEHIDRAFT_134801
09123 Folding, sorting and degradation
03018 RNA degradation
STEHIDRAFT_134801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_134801
03041 Spliceosome [BR:
shs03041
]
STEHIDRAFT_134801
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
STEHIDRAFT_134801
mRNA degradation factors
5'-3' decay
Lsm complex
STEHIDRAFT_134801
Spliceosome [BR:
shs03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
STEHIDRAFT_134801
Complex C
U2 snRNP components
STEHIDRAFT_134801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
18798384
NCBI-ProteinID:
XP_007309830
JGI:
Stehi1_134801
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MLIFSVFKTLTDQRVTVELKNDLSITGTLKSVDQFLNIRLDQIEVMDPARHPHMMAVKNC
FIRGSVVRYVQLPSEHVDTQLLEDATRRESANQAKR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcttctccgtattcaagacgctcacggaccaacgcgtcaccgtcgagctcaaa
aatgatctttctatcactggaacgctcaagtctgtggaccagttcttgaacatcaggttg
gaccagatcgaggtgatggatccggcgcgacacccacacatgatggcggtaaagaactgc
tttattcgtgggtctgtggtgcggtatgttcagctgccatcagagcacgtcgacacgcag
ttattggaggacgccacacgacgagaatccgccaaccaggccaaacgatga
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integrated database retrieval system
