Stereum hirsutum: STEHIDRAFT_135171
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Entry
STEHIDRAFT_135171 CDS
T03127
Name
(RefSeq) pseudouridine synthase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
shs
Stereum hirsutum
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shs03016
]
STEHIDRAFT_135171
Enzymes [BR:
shs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
STEHIDRAFT_135171
Transfer RNA biogenesis [BR:
shs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STEHIDRAFT_135171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
18798417
NCBI-ProteinID:
XP_007310312
JGI:
Stehi1_135171
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MAPDPLPLPATRPGLKKIAPYWYPYTTMAKGRWFDREILEVVSTEFRDRSVEYYRYALES
GVTTVNGKIARPGTILRNGDRLENIVHRHEPPVTSTPVQILHTDYEREFIVINKPGSIPV
HATGRFFYLSLVEILQREFGFKKVYTVNRLDRLTSGIMVVGLSSKRAHTLSEEFTAGQVK
KEYIARCKGEFPEGETYVDQPMLTVDRQMGLNIIHPEGKTAQTIFTRLHYDANTDTSVLH
CRPLTGRSHQIRVHLQYLGHPVANDPIYSETKIWGPNLGKGGIDINPSDERSAPAPPPQF
QTTNAPNPEQLSRSPKTQSIDPWYPSHENDLSAVDPSSSKVASDEKVEGGEPVSLGAKYQ
TQPVEVKPLPRETGHDIGMGSPVPLSAEAVNVITKLRNMKDEDEDWSRWRDVVFKAKGKL
HPSGLKIKPLQPQSKRKRGGPGWVDGAPPPVEVAQESGTATPEVVADQNDGMLYCPECYL
PLHPDPKPERLYIFLHALRYTTSLGVFETGMPEWAEEGWEWERDE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgaccctctcccattgcccgcgacaagacccggattgaagaagatcgcaccg
tattggtacccgtatacgaccatggcaaagggcaggtggtttgacagggagatattagag
gtcgtgtcgacggagtttcgagacaggtcggtggaatactaccggtatgccctcgagtct
ggggtgactacagtaaatggaaaaattgcgcgacctgggactatcctccggaacggagac
agactagaaaatattgtccatcgccacgagcctcctgtcacctcaaccccagtccagatc
ctgcataccgactacgaacgagaattcatcgtcatcaacaagcccgggagcatccccgtt
catgccacagggcgtttcttctatctctccctcgttgagattctgcaacgcgaattcggt
ttcaagaaagtctacaccgtaaaccgtctcgatcgtctaacctccggcatcatggtcgtt
ggcctctcctcgaaacgagcacacaccctctccgaagaattcactgctggtcaagttaag
aaggagtatatcgctcggtgtaagggcgagttcccggaaggggagacgtacgtcgaccag
ccgatgcttacggttgatcgccagatgggtcttaacatcatccatcccgaaggaaagacc
gctcaaaccatcttcactcgtctccactacgatgcaaacacggacacgagtgtcctccac
tgtcgtcccctcacaggccgctcccatcaaatccgtgtacatctccaatacctaggccac
ccagtcgccaacgacccaatctactccgaaaccaaaatatggggtcccaatctcggtaaa
ggtggaatcgacatcaacccctccgacgaacgttccgctcccgcgccacctccccaattc
caaaccaccaacgcccccaacccggaacaactctctcgctctccgaaaactcagtccatc
gacccttggtatccatcccacgagaacgatctttccgcggtggacccatcgtcctcgaag
gtggcgtcggacgaaaaagttgaaggtggcgagcctgtttcgctaggtgcgaagtatcaa
actcagccggtggaagtgaaacctcttccgagagagactggacatgatattgggatggga
tcgcccgtgccgctttcggctgaggctgtcaatgtcatcaccaaactgagaaacatgaag
gatgaagatgaagactggtctcgttggcgagacgtcgtcttcaaagcgaagggaaagctt
catccatcaggtttgaagatcaagccactccagccgcagagtaaacggaaacgcggtggc
ccaggatgggtggatggggctccacctcctgtagaggtagcacaagaaagcggaaccgcc
acccccgaagtcgtggcggatcagaatgacggtatgctgtactgtccggagtgctatctg
ccgttgcatccggatccgaaaccggagagactgtatatattcttgcatgcgttgaggtat
acgactagtcttggggtgttcgagacggggatgccggagtgggcggaggaggggtgggag
tgggagagggatgagtga
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