Stereum hirsutum: STEHIDRAFT_137131
Help
Entry
STEHIDRAFT_137131 CDS
T03127
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
shs
Stereum hirsutum
Pathway
shs04138
Autophagy - yeast
shs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
STEHIDRAFT_137131
04148 Efferocytosis
STEHIDRAFT_137131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shs04131
]
STEHIDRAFT_137131
Membrane trafficking [BR:
shs04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
STEHIDRAFT_137131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
KBP_C
Motif
Other DBs
NCBI-GeneID:
18798604
NCBI-ProteinID:
XP_007300150
JGI:
Stehi1_137131
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MAPFERAESVLSGFKDRVDSVAVQGDRLYLGTSIGNLHVYSFKDDAGPAEEVVVKKGLAR
RSIEQLGYVKDINSLVVLAEKQVTLYPLPDLSPPTVLSKAKAAFSFAVHTSVQHLLPDGQ
PVQTSSVGFDKTTAVPTVITYLLVGCQRKLVIYSWKDGEAQDVKEAVLPHSPRTMAFLNN
DIVCLAYQPEFVLFSLRTHSITEVTTPVPPTLSAQGISSMGKGALSGLGGYMTLGLGAKA
KPCAVNVGDSEALIAKENFGVFIGPDGKQSRTPQVEWPATPEDLAFVKPYIFTLLPAGTV
PTASITNSISSASTIPFSPSPVLQIRSSISLQPSQTLSFPFDPSTSSSSEATTPSATTHT
LRLLTPSPNAKSPLFVISTPVDRAMAASEGSSMWKFKMKGWGEQVDELVADGSYDEAIKL
LDTIDEAVLPDKDRRKSLCQALHAVSQFSSAHFDEALDTFVTLNINPAKVIALYPSSVSG
RLSVPQQEWIPLFGGPKSKPKRKSGSLSVSASSDHQTDEAKRSSIFEEGQGQEDEDGAST
EESGPSRGRSPPPGGTAPASRSRWKPALDVFRPGGGRDSETASISSVKQRRPNDTFTRSV
ESLLRYLPDRRIKLATSLEAFHITSLQAHEHKTLLSSTPLVELFTIPSYAPLSNLTPQQL
VQCAQVVDTALFKAYMVIRPGLIGSLCRQPNWCEVEEVEEILMSKEKYTELIALYNGKKM
HSKALDLLHTLSEKETDMRDKLEPSIIYLQRLGPEHLDQIFKSSRWLFDQDADMAFEIFT
SEEVELPRDPVIAYLEGIDSRLGARYLEYLMQERKEESTHNGDRLAELYLKMTKDAKRKR
DEETRKQVYDKFLEFIDKSQHYQVDRLFGHLPAEDFFEAKAILLGRLSRHDSALEIYVYR
LHDYVKAEEYCKRVYVPTSATSSIFLTLLRIYLRPSPSYQPYQPSHTSQDKDNTLLRPAL
DLISRHSRRIDAEEALQLLPPLVSAHDLRAFLIEALREPVFDTMVVRDISKARSEQVARR
LMWLQSNRVKVTDSRICPQCHKRIGHSSIAVHTPGGEVTHYHCREAFSHKLKEMRHT
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggccccgttcgaaagagcagagagcgtgctcagcggattcaaagacagggtagactct
gttgccgttcaaggggacagactgtacctcggaacgtcaatagggaacctgcatgtttat
tcgttcaaggacgatgcaggtcccgcagaagaggtcgtagtcaagaagggccttgcaaga
aggtccatcgaacaactaggctacgtgaaggacatcaactctctagtcgtccttgccgag
aagcaggtcacactctacccactccctgacctctcgccacccaccgtcctctctaaagcc
aaagccgcgttctccttcgcagtccatacctccgtacaacatcttcttcctgacggacag
cccgtccagacttcatcggttgggtttgacaagacgacggctgttccgactgttattact
tatttgttggtgggatgtcagaggaaattagtgatttattcgtggaaggatggtgaggcg
caggatgtcaaagaagctgttcttccccattcgccacggactatggcgtttttgaacaac
gacatcgtatgtctggcgtaccagcccgaattcgtccttttctcactacgaacacattca
atcactgaagtcacgactccggtcccacccacactgtctgcccaaggcatcagcagcatg
gggaagggcgctctatctgggttgggagggtatatgactcttggtttgggagcaaaggca
aagccgtgtgcagtgaatgttggtgactcggaagcgcttatagcgaaagaaaactttgga
gtgttcatcggtccggacggtaaacaatcgcgtactccacaggtcgagtggcccgcaact
ccagaggacctagctttcgtcaagccatatattttcacattattacccgccggcacggtc
cccaccgcctctatcactaactccatatcctccgcctccacaattcccttctctccatcc
cctgttcttcaaatccgctcctcaatttccctccaaccctcgcagacgctttcattccct
ttcgatccttcgacgtcttcttcttccgaggccaccacaccttctgccaccacacacacc
ttgcgactgcttactccttccccaaacgccaagtcgccgttgtttgtgattagtacaccg
gtggacagggctatggcggcaagtgagggcagctcgatgtggaagtttaagatgaagggt
tggggagaacaggtggatgagttggttgctgacgggtcgtacgatgaagccataaagctg
ctggatacgatcgacgaggcggttttacccgataaggatcgtcgaaagagtctctgtcaa
gccctccacgcagtctcccagttctcgtccgcccactttgacgaagcactagacacgttc
gtcactctaaatatcaacccagcaaaggtcattgcgctctatccttcttccgtctctgga
cgcctgtccgttcctcagcaagaatggatcccgctttttggcggcccaaagtctaaacct
aaacgtaaatcaggatcattatcggtgtcggcgtcttctgaccatcagactgatgaggcg
aagaggtcttcgatatttgaagaggggcagggacaggaagatgaggatggggcttcgacg
gaagagagtgggccgtcaagaggacggtcaccgccaccaggggggaccgcaccggcgagt
agaagtagatggaagccggctttggatgtgttcaggcccggcggtggaagagattccgag
acggcgtcgattagtagcgtgaagcagagaaggcctaatgacacattcacccgctccgtc
gagtccctccttcgttacctccccgaccgccgcatcaaactcgcaacctctcttgaagcc
ttccacatcacctccctccaagctcacgaacacaagaccctcctctcctccactccgctt
gtcgaactcttcaccattccttcctatgcaccactctcgaaccttacaccgcagcaattg
gtgcaatgtgcacaggtggtggatacggccctgttcaaggcgtacatggtcattaggcct
gggttgattgggagtctttgtaggcagcccaattggtgtgaggtggaagaggtggaagag
attctgatgtcgaaggagaaatatacagagcttattgcgctgtataacggaaagaagatg
cattcgaaagctttagatctcttgcatacgttgagcgagaaggagacggacatgcgggat
aaattggagccttcgatcatatacctccagcgactaggacctgaacacctcgatcagatc
ttcaagtcgtcgcgatggctgttcgaccaggacgctgatatggctttcgagatattcaca
tctgaagaagttgagctccctcgagatccagttattgcttacctcgaagggatcgactcg
agactcggtgcgcgatatttggagtatttgatgcaggagaggaaggaggagtcgacgcat
aatggcgacaggcttgcggagctatacctgaagatgacgaaggatgcgaagaggaagcgg
gacgaagagaccaggaagcaagtgtacgacaaattcttggaatttatcgacaagtcgcaa
cattaccaagtcgacagattgttcggacatctaccggccgaagatttcttcgaagcaaag
gctatccttctggggaggttgagcagacatgacagtgctctcgagatctatgtataccgg
ctgcacgactacgtcaaggcagaagagtactgcaaacgagtctacgttcccacctccgcc
acctcctccatcttcctgactctcctccggatttacctccgcccctcaccgtcctatcaa
ccctatcaaccttcccacacatcccaagacaaagacaacaccctcctacgtcccgcactg
gatctcatatctcgccacagtcgtcgcatcgatgccgaagaagcacttcaactccttcct
cctcttgtatctgctcacgatctacgagcattcttgatcgaagcactgagagagccggtg
ttcgatacaatggtggtgagggatatcagtaaggctcggagcgaacaggtggcgaggagg
ttgatgtggttgcagagtaatagggttaaggttactgatagtcgaatatgcccgcagtgt
cacaagagaatcggacatagttctatcgctgttcatacgcctggcggcgaggtaacacat
tatcattgtcgggaggcattctcccacaaactgaaggagatgaggcacacgtag
DBGET
integrated database retrieval system
