Stereum hirsutum: STEHIDRAFT_137563
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Entry
STEHIDRAFT_137563 CDS
T03127
Name
(RefSeq) Utp21-domain-containing protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
shs
Stereum hirsutum
Pathway
shs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
STEHIDRAFT_137563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shs03009
]
STEHIDRAFT_137563
Ribosome biogenesis [BR:
shs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
STEHIDRAFT_137563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
PROPPIN
Beta-prop_VPS8
Beta-prop_HPS5
Hira
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Nucleoporin_N
WD_LRWD1
Beta-prop_SCAP
Beta-prop_WDR35_2nd
Beta-prop_RSE1_2nd
DUF4097
Motif
Other DBs
NCBI-GeneID:
18798642
NCBI-ProteinID:
XP_007301043
JGI:
Stehi1_137563
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MVAATVSIVSDDERSPPPRKRIRPLTSDAKTKQSTSASSPQLYAPFRALGIITNHVPIVV
QTRSFKGATEGPKIHLLTCLGRSWALWEGGKMSLLFAGPDSGDTISSMVMDGDAVWVASG
PNAIKYARGKEVSRLSDPLGAPLASLLVFGPQLLALTADGRRLLVWDTAQEEFDHQIQFD
EGFTATHILHPATYLNKIIVASSGGDLQLWNIRTQNCIHKFSSSNLLIGSSSTAPTAITS
IAQSPAIDVLAVGFASGEISVYDIRADERLMRIFMREGSVRAISFRSDGQPILASASETG
HISLWDLSANGRLLHTVRGAHDSGITALEWVPGQPVLISSGEDNSVKQWLFDSPTAPPRL
LKFRSGHHAPPHLIRYYGEDGKQLLTASRDRSLRCTSIVRDSRSFELSQGSLSKKASTLS
VPIASLKLPSITSISFSTTRWKDWDDIMTAHTDETFARTWSMLQKKKGNHALGLADGSKK
TTVGSVKAVCVSACGNFGLGSSSTGAIVMWNMQSGMQRKTFNVGPCPPDAASRFRPQSGK
KKAEERCVTGLATDALNRVVIASTLDGTLNFFDFHTTKLEHTLTLQTAIVSIALQRNSGL
LALTCDDLVVRLVDIETRKVVREFTGFVGRILDLTFSPDSRWLITTSLDSVIRTFDIPTG
RLIDAFRTTSVATSVSFSPTGDFLATSHVDSVGVFLWANRAQYTDVSYRSMKEEDIQDVA
LPVMQGEGDAEADALEGLSALTVQETPQDLFSSPSNLDGDLVTLTLLPRSRWQTLLNLEV
IQQRNKPKDPPKPPEQAPFFLPTLPGVEHRFAIDQKQESQSNKTTRRLDKIAAETESVFL
KKLAEADPQGNHEEFFTYAKSLSPAAVDLELRSLVTLDVLHSFIHALTQRLRSHRDFEAV
QTYLNVFTRMHGDVLIENAELRGELEMLLKVQKKESERVLELIASSLGTLAFVRDTL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggcaaccgtctctattgtctctgatgacgaacgaagtccccctccccgcaaa
cgcattcgaccccttacctccgacgcaaaaaccaagcagagcacaagtgcaagctctccc
caactatacgccccattccgtgctctcggtataatcaccaatcatgtaccaatcgttgtc
caaactcggtcgttcaaaggagctacagagggccccaaaattcatctcctaacatgtcta
ggaaggtcatgggctttatgggaaggcggaaagatgagccttctgtttgctggacctgat
tcaggagacactatctccagtatggtcatggacggcgatgcggtatgggtggcgtctgga
cctaatgcgattaagtatgctcgaggaaaggaggtttctcgcctatctgacccactcgga
gcaccccttgcttccctcttagtatttgggccacaattgctcgctctcaccgcggatggt
cgacggctgctcgtctgggatacagcccaagaagaattcgaccaccagatccaatttgat
gaaggcttcactgcaacacacatactgcaccctgcaacgtatctgaacaagattattgta
gcaagcagtggtggagatctacaactatggaacatcagaacccaaaattgcatacacaaa
ttttcatcgtcgaaccttctaattggatcctcatctaccgcgcccaccgccataacctcc
atcgcacaatctcccgccatcgacgtattagcggttgggtttgcttccggcgaaatatca
gtgtatgatatcagagcggatgagcgtctcatgcgcatctttatgcgcgagggcagtgtt
cgagccataagtttcaggtctgatggtcagcccatcctcgcttctgcatcggaaaccggc
cacatatccttgtgggatctcagtgccaatggtcggctattacacaccgttcgtggtgca
catgatagcgggattacagctctggaatgggtaccaggacaacccgtgctgatcagttcg
ggggaggacaacagtgtgaagcaatggttgtttgattcaccaacggctccccctcgatta
ctcaagtttcggtcgggacatcatgcgccaccacatcttatacggtactatggtgaggac
ggcaagcaactgttgaccgcatcgagagaccggagcttgcgttgtacatccatcgttcgc
gattctagatcgtttgagctctctcagggctccctctcaaaaaaagcgtccacgttatca
gtgcccatcgcgtccttgaaactcccgtccatcacgtccatatcgttctctacaacaaga
tggaaggactgggacgacatcatgaccgctcatactgacgagacgttcgcgagaacgtgg
agcatgctgcaaaagaagaagggcaaccatgctctgggtcttgcggatgggagcaagaaa
actactgtcggctcagttaaggccgtatgcgtatcagcttgtggcaactttggcctcggt
agttcgtcgactggcgctatcgtgatgtggaacatgcagtctgggatgcaacgcaagacg
ttcaatgtagggccttgcccaccggacgctgccagtcggttccgtccacagagcgggaag
aaaaaggccgaggagcgatgtgtgacaggcctcgcaactgacgccttgaaccgagtcgtt
attgctagcacactggacggaacacttaacttcttcgatttccacaccacaaaactagag
catactctgacccttcagacagccatcgtatcaatagctttgcaaagaaatagcggcctg
ctcgctctgacctgcgatgacctggtcgtccgcctggtcgacatcgagacacgcaaagtc
gtccgtgaatttactggatttgttggacgtatcttggaccttacgttctcccctgattca
cgatggctcatcacaacatcactcgattctgtcatccgaactttcgacatccctactgga
cggctcatcgatgctttccgcaccaccagtgtggccacgagtgtctcgttctctcctaca
ggcgattttctggcgacttcccacgtagacagcgtaggggtgttcctctgggccaaccgt
gcacaatacacagacgtgtcgtaccgcagcatgaaggaggaggacatccaggatgttgct
cttcctgtcatgcagggcgaaggtgacgcggaagctgatgctctggaaggtctctccgcc
ctcacggtacaggagacacctcaagatctctttagtagtccatcaaacctggatggagac
ctcgtcacacttacgctcctgccccgctcccgatggcagacattacttaacctagaagtc
atccagcaacggaataagcccaaagatccaccaaaaccgcctgaacaagcgcccttcttc
ctgcccacactgccgggggtggagcaccgcttcgccatcgaccaaaagcaagagtcgcag
tcgaataaaacaacgagaagactcgataaaatcgctgcggagactgagagcgtcttcctc
aagaaacttgccgaagccgatcctcagggcaaccacgaagaattcttcacctacgccaaa
tcgctctcccccgctgccgtcgacctcgaactgcgctcgctcgtcaccctcgacgtcctc
cactccttcatccatgcactcacccagcgtctacgctcacatcgcgatttcgaagccgtc
cagacctacctgaacgtcttcacacgcatgcatggcgatgttttgatcgagaatgcggag
ctaagaggagagctggagatgctgctgaaggtgcagaagaaggagagcgagagggtgttg
gagttgattgcgtcgtcgttggggacgttggcttttgttagggatacgttgtga
DBGET
integrated database retrieval system