Stereum hirsutum: STEHIDRAFT_137848
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Entry
STEHIDRAFT_137848 CDS
T03127
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10755
replication factor C subunit 2/4
Organism
shs
Stereum hirsutum
Pathway
shs03030
DNA replication
shs03410
Base excision repair
shs03420
Nucleotide excision repair
shs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
STEHIDRAFT_137848
03410 Base excision repair
STEHIDRAFT_137848
03420 Nucleotide excision repair
STEHIDRAFT_137848
03430 Mismatch repair
STEHIDRAFT_137848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shs03032
]
STEHIDRAFT_137848
03036 Chromosome and associated proteins [BR:
shs03036
]
STEHIDRAFT_137848
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_137848
DNA replication proteins [BR:
shs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
STEHIDRAFT_137848
DNA Replication Termination Factors
ELG1-RFC complex
STEHIDRAFT_137848
Chromosome and associated proteins [BR:
shs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
STEHIDRAFT_137848
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
STEHIDRAFT_137848
Check point factors
HRAD17(Rad24)-RFC complex
STEHIDRAFT_137848
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
AAA_assoc_2
AAA_11
AAA_16
AAA_2
AAA_lid_2
RuvB_N
AAA_24
SLFN-g3_helicase
AAA_5
AAA_7
Mg_chelatase
AAA_30
AAA_28
AAA_14
AAA_19
ResIII
Cdc6_lid
bpMoxR
DUF815
AAA_18
Motif
Other DBs
NCBI-GeneID:
18798661
NCBI-ProteinID:
XP_007301376
JGI:
Stehi1_137848
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MNSFFQVQPSRKATKEQVSADTNLQPWVEKYRPKTIEDVSAQEHIVAVLEKTLTSTNLPH
MLFYGPPGTGKTSTILALSRQLFGPDNFRSRVLELNASDERGIAIVREKIKNFARQTPRA
QAVSSDGKAYPCPPYKIIILDEADSMTQDAQAALRRIMETYAHITRFCLVCNYVTRIIEP
LASRCSKFRFKPLDDSSSTNRLEHIALSEQLRVKPDVFSALISTSGGDLRRAITYLQSAA
RLSAASETETTISPRDIQEIAGVVPDAVINNFARSLGIEVVNTEEGEEMDVDMDADQSTK
LKGFDLIRNKVRAMMREGYSASQVLTQLHDIIILHQNLTARQKSKCALVMAEADKALCDG
SDEELWVLEVALKVNKAVS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaattccttcttccaagtacaaccgtcgagaaaagccaccaaggagcaggtatccgct
gatacaaatcttcagccatgggttgagaaatatcggccaaaaacaattgaggatgtatca
gcacaagaacacatcgttgctgtacttgaaaagactctaacatcaacaaatctcccacac
atgctcttctatggccctcctggaacggggaagacatccactattctagcattgtctcgt
caactctttggaccagataatttccgttctcgagtcttggaactgaacgcctcagacgaa
cgaggaatcgccatcgtacgtgaaaagatcaagaacttcgcccgacaaactccacgcgca
caagcggtctcgtcagacggcaaggcatacccatgtccgccctacaaaattattattctt
gacgaagcagacagtatgacacaagacgcccaggctgcacttcggcgaatcatggagacg
tatgcacatataacccgtttttgcttggtttgcaattatgttacacgaatcattgagcct
ctcgcctcccggtgctccaaattccgtttcaagcccctcgacgactcatcctcgacaaat
cgtctagagcatatcgccctctccgagcaactccgcgtaaaacccgatgtcttttcagcc
ctcatctccacctcaggcggtgacctccgtagagccatcacatacttacaatccgccgct
cgtctatcagccgccagtgagacagagaccaccatctcaccgcgagacattcaagagatc
gcaggtgtagtgccggatgctgtgattaacaacttcgcacgttctctgggtatcgaagtt
gtcaatactgaggaaggggaggagatggatgtggacatggatgctgatcagtcaactaag
ctgaaaggctttgatcttatccggaataaggtgcgggcgatgatgagggagggctactca
gcctctcaagtcctaacacaactccacgacatcatcatcctccatcagaacttgactgcc
cgtcagaaatcgaagtgcgccctagtcatggcagaggccgataaagcgctatgtgatggg
tcagacgaggagctttgggtcttagaggtagctttgaaggtgaacaaggcagtctcataa
DBGET
integrated database retrieval system
