Stereum hirsutum: STEHIDRAFT_138734
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Entry
STEHIDRAFT_138734 CDS
T03127
Name
(RefSeq) Rap30/74 interaction domain-containing protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
shs
Stereum hirsutum
Pathway
shs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
STEHIDRAFT_138734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shs03021
]
STEHIDRAFT_138734
Transcription machinery [BR:
shs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
STEHIDRAFT_138734
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
18798755
NCBI-ProteinID:
XP_007303028
JGI:
Stehi1_138734
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAPVPAGAALLFHPKKNAKRPIAPPRSVSPNKPAAPKPKPVAPVVDDDAPPPLPDGPYTE
FKLVSSALNGWKYDVMKFDSRKPVDVFTWQAPVKLNRKDLRRQNPNAEPDESESRAVGPM
LGPDGKAVIGMDGRMVMVDAEGKPIHPGQPSMPAKDKPKDGVQKRKKPPKKTKQVFKIPE
ATRQLRREERYPWVMEDGIGRETWVGSMEEASKSETHAFFMPAQNNTFKFVPAHRWYKFQ
KKPSHYIPTLEEAEAAMAARNKNKDPSLWLKQKRGGQAPSAATAAMFKAESDGSNDLSQN
FAPNGRRLRTVRREDELFGDDDDEGGARRRRADGADADFEEIPYHEEFADDEEKMGVEEE
EDEVEKEMEERLQREYMSANKQRDGHVDEDADDEDDEETSTAKAMRKLLTKRDKNAAYDS
DEEKNPYASSEEEEEDEQVISNEPAVQSHLTTRPSRPQTPSQTKPSQPGLPTTTTSSSTD
PNARAKSPTVGSPVSDHGGHSVVAKRATSPKMPKPKSVNGIPRATSPLAQARPPVANGSS
AKMIKPASPSSSSPAASSPKVGNKRKATDDTGDSSAPVPSTSNEGGQPKPKKRKPAGPAI
DANGNLIELTDEMVLDWLRKTPNVKTRDCIAYFTPYLHNEEQKQNFTALIKTVASLKNGV
LVLKSVYRNGGRRSNGSSPASTPMDLA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgttccagctggcgcagctctgcttttccatccgaaaaagaacgcgaaaaga
cctatagcgcctccccgttccgtttctcccaataagcctgcggctcctaagcccaaacct
gtcgcacccgtcgtcgatgatgacgccccaccgccactcccagacgggccatacacagag
ttcaagctcgtttcgtccgctctcaatggctggaagtacgatgtcatgaagttcgactcg
cgaaagccggtcgacgtctttacctggcaggccccggtcaagcttaatcgcaaagacctt
cgccgacaaaatcctaacgcagaacctgacgaatcggagtctcgagcggtagggccaatg
cttggcccagatgggaaggcggttatcggcatggatggtcggatggttatggtagatgca
gagggaaagcctatccatcctggccagccctcgatgcccgccaaggataagcctaaggac
ggtgtccagaagaggaagaagcctccgaagaagacgaagcaggtattcaagataccagaa
gctacgaggcagttgaggagagaggagagatatccctgggttatggaggatggaattggt
agagagacgtgggtgggaagcatggaggaggcgagcaagtctgaaacccacgctttcttt
atgcctgcccagaacaatacgttcaagttcgtcccagcgcaccgctggtataagttccag
aaaaaaccatcacactacatcccgaccttagaggaggcggaggcagcgatggcggccagg
aataagaacaaagatccctctctctggttgaagcagaagcgtggtggtcaagccccatct
gccgccactgccgccatgttcaaggccgagagcgatggatcgaatgatctctcgcaaaac
ttcgctccaaatggccgtcggttgcggacagtacgcagggaggacgaattattcggtgat
gacgatgatgagggtggagctcgtaggaggcgggcagacggtgcagatgcagacttcgag
gagattccttaccacgaggaattcgcggacgatgaagaaaagatgggcgtagaggaagag
gaggacgaggtagagaaggagatggaggaacggcttcaacgggaatacatgagcgcaaac
aaacaacgtgacggtcacgtcgatgaggacgccgacgacgaagacgatgaggagactagc
acggcgaaggctatgcgtaaactcctgaccaaacgagacaagaacgcagcatatgattct
gacgaagagaagaatccatatgctagttccgaggaagaggaggaggatgaacaggtcatt
tcaaatgagccggccgtccagtcacacctcactactagaccatctcgaccgcagaccccc
tctcagacgaaaccatctcagccaggtcttcccactaccaccacatcctcttcaactgat
ccaaatgctcgtgccaaatcacctaccgtcggctctccggtgtccgaccacggcggtcac
tcggtcgtcgcgaaacgcgccactagccccaagatgcccaaaccaaagtccgtcaacggg
atccctcgggccaccagcccactcgcgcaagcccgcccaccagtcgccaatggatcctcg
gcgaagatgatcaaacctgcatcgccttcatcttccagtcctgccgcaagttctccaaag
gtgggcaataagcgcaaggcgacggacgacactggcgattcatccgcacctgttccgtcg
acgtcgaacgagggtggtcaaccaaagcctaagaagcgcaagcccgccggcccagcaatc
gacgccaacggcaatctaatcgagctcaccgacgagatggttctcgactggttgaggaag
acgcctaatgtgaagacgagggactgtatcgcgtacttcactccgtatctgcacaacgag
gagcagaagcagaatttcaccgcgctcatcaagaccgttgcctctttgaaaaatggtgtt
ttggtgttgaaaagcgtctacaggaacgggggaaggcggagtaatggatcgtctcctgca
tcgacacccatggaccttgcctga
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