Stereum hirsutum: STEHIDRAFT_145207
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Entry
STEHIDRAFT_145207 CDS
T03127
Name
(RefSeq) ribosomal protein S5 domain 2-like protein
KO
K12587
exosome complex component MTR3
Organism
shs
Stereum hirsutum
Pathway
shs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STEHIDRAFT_145207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shs03019
]
STEHIDRAFT_145207
Messenger RNA biogenesis [BR:
shs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
STEHIDRAFT_145207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18799412
NCBI-ProteinID:
XP_007301086
JGI:
Stehi1_145207
LinkDB
All DBs
Position
Unknown
AA seq
264 aa
AA seq
DB search
MAQQFDRRRVNGPEDSAAPVFLEDEDVSGSPYATWKAGDPRVGRQPLDIRPIFLKAGLIS
QANGSAYIEAERTKIACAVYGPRQSKNTSYSENGRLNVEVKFSPFSCATRRAPLRDAEDR
SVAVLIQQALTPSVRLELLPKSVIDIFVTVIENDGTEGCVAAASLAASTALADAGIEMLG
LVTSCSSSLVGKDVWLDPTEQETTLAEGNLVFACIPALGLVTSVWETGRMLPSQAAQCME
RCQERCTDIHQIAVQSLLENADTK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcagttcgatagacgacgcgtcaatgggccagaagatagtgccgcacccgtt
tttctagaagatgaggatgtctctggctcaccatatgcgacttggaaagcgggagaccct
cgagtaggacgccaaccactagacatccgacccatatttctgaaggcgggattaatcagt
caagctaatgggtctgcttatattgaggctgagagaaccaaaatcgcttgtgctgtctat
ggacctcgacagtcaaagaacacctcatatagcgagaacggtcgactgaatgttgaagtc
aagttctcccccttctcctgtgcaactcgcagagcgccattacgcgatgcggaagatcgg
tctgttgcagtgctcattcaacaggcactgaccccttccgtccgattagagctgcttcct
aagtccgtcattgacatatttgtgacggtcattgaaaacgatggcacggaaggttgtgtg
gcggcggcctcacttgctgcttccactgctctggcagacgcagggattgagatgttggga
ctggtcacgtcttgttcatcgtcgttggtcggcaaagatgtttggcttgatccaacagag
caagaaacgacattggcggagggtaacctggtgtttgcatgcattccagcgctgggtctt
gtcactagtgtttgggaaactgggcggatgttgccatctcaggctgcacagtgcatggaa
cggtgtcaggagcgttgcactgacatacaccagatcgctgtacaaagtcttctagaaaat
gcagacaccaaatga
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