Stereum hirsutum: STEHIDRAFT_145410
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Entry
STEHIDRAFT_145410 CDS
T03127
Name
(RefSeq) DNA mismatch repair protein MSH3
KO
K08736
DNA mismatch repair protein MSH3
Organism
shs
Stereum hirsutum
Pathway
shs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
STEHIDRAFT_145410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shs03400
]
STEHIDRAFT_145410
DNA repair and recombination proteins [BR:
shs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
STEHIDRAFT_145410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
18799434
NCBI-ProteinID:
XP_007301270
JGI:
Stehi1_145410
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MANSKDPPASPMKQSRISTFFSQSPTSQAKTARRHSPVPDERPSKRQKTIQKPLFRQDSP
QLDSDSELHGNQQHSVATERWRHRRSQSPESHPLQLSPAEQASRDNLRAVLSKKLVIENN
VSRRRDLDIQQDFEPSDEDETDDEEQRSVASDGDSDSQFKALQEMFSQPSKSKLKGKAAS
GKKSVKPRGKTVEIGPSGKRYTPLELQVRQLKDKYEGVLLMFEVGYKYMFYDNDARIAAK
ELGIVCFVKRNFETASIPTHRGDIHLKKLLSQGHKVGIIAQTETAALKKVGENRNAPFTR
ELAHLYTATTFVDEMDSVDASGASAPLLMCVVEEPKGGMGVDEKVIVGMIVVCPNTGDVT
WDEFEDGHMRTELETRMVHTKPAELLLSGQKLSKPTERMLGYFVTHANGDHKIRMERYKD
PMTYSDAFEYVSAFYTRKTTSSKASESFKSGELMAAVTDFPKQVVIALAQCIRHLEAFDI
ADSLLATKFFSAFITTNHMLLNGNTLTNLEIYRNETDFTTRGSLMWILDRTTTKFGSRLL
RSWVGRPLVNKLALQERTDTVEEIVASPSMKLVQLRSALRGLPDLAKGLSRIQYGKCTPK
ELSVLLPAFNKVAIIFPAMDNVSDVGFKSPILNDIIATLPRLREPVQELISMIVLKRAAE
GDKTLMWSDSEKYPALAEADMGIQAVEMDLADELKSIRRVLKKPALQWSSSRGDEYLVEI
PKAESSRVPATWHLISSTSRFRRYHSPVVKAKVQERAQFKEMLEAAANDAFKSFLNEISQ
NHYALLRDAVNKLAIADCLMSLALVAMKGDYVKPEFTDEVDTLEIIDGRHPGGEELKSEP
FVPNSVTMGQGGQRSKIITGPNMGGKSSSVKMIALIAIMAQIGSYVPAKAVKLSMMDSIL
TRMGASDELARGRSTFMVEMSETSDILSQATSKSLVILDELGRGTSTFDGMAIAQAAMHH
LVQVKKCKTLFITHYPLVATELERRFPQEVQNLHMGFREESRINGIREISFLYRLTEGLA
TESFGIECGRLAGIPEEVLQASAVQAAKMRRQVEERHRRNKTRKAALLLQRCLQAPCSDT
LDNLRDAMDSLSTTQTNI
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgaaggatccaccagcgtcgccaatgaagcagtctaggatatctacgttt
ttctcacaaagtcctacatctcaggcgaaaactgccaggcgacactcacctgtacccgat
gaacgaccgtccaaacgccaaaagacaatccaaaagccactatttcgccaggactcccca
cagcttgactcagattcagaactgcatggaaaccagcagcattcagtagcgacagaaaga
tggcgacatcgtcgttcccagtctcctgaaagtcaccctcttcagctctctcctgcagag
caggcctctcgcgacaacttgcgtgccgtgctttccaagaaacttgtcatcgaaaacaac
gtctctagaagacgagacttggatatacagcaggattttgaaccctctgatgaggacgag
acggacgacgaggaacagcgttccgtagcttcagacggcgactcggacagtcagtttaag
gctctgcaggagatgttctctcaaccctcgaagagtaaactcaaggggaaggcagccagt
ggaaagaagtcagtcaaaccgcgcggcaagactgtagagatagggcccagtggaaagcga
tatacgcctctggagctacaggttcgtcaattgaaggacaagtatgaaggtgtgctcctc
atgtttgaagtgggatataaatacatgttttatgacaatgacgcccgtattgctgccaag
gagctcggaatcgtctgtttcgtgaagcgtaattttgagactgcatcgatccctacccac
cgcggtgacatacacctgaagaagctgctctctcaaggccacaaagtaggcatcatcgcc
cagacagaaaccgctgcattgaagaaagttggtgaaaaccgaaatgcgcctttcactcgg
gaacttgctcacctatacaccgccacgacctttgtagatgagatggactcggtggatgca
tctggcgcttcggctcctctcctcatgtgtgtggtcgaggagccaaaaggtggcatgggt
gtagacgaaaaggtcatcgttgggatgattgttgtttgtcctaacacgggcgatgtgacc
tgggacgaattcgaagatggtcacatgcgcacggaactcgaaacgagaatggtccacaca
aagccagcggagttattactctcaggtcagaaactaagcaagccgaccgaacgcatgcta
ggctacttcgtgacgcacgctaatggcgaccataagattcgaatggagagatacaaagac
ccgatgacttattcggatgcctttgaatatgtgtccgcattctacacacgcaagacaacg
tcttcgaaggcgtctgagagcttcaagtccggtgaactaatggctgctgtgaccgatttc
ccgaagcaagtcgtaatcgctttggcccagtgcatcagacatctggaagcctttgacatc
gcggattcactcctggccacaaaatttttcagcgcgtttattaccacgaaccacatgctt
ctgaatggcaacacactcacgaacttggagatctatcgaaatgagactgatttcacgaca
cgggggtctctgatgtggatactggatcgtacgacaacaaaatttggctccaggctgctt
cgaagttgggtcggtaggccactggtgaataaattagcattgcaagaacgtacagacact
gtggaagaaattgttgccagcccttccatgaagttggttcagctgcggtcggccctcagg
ggtcttcctgatctcgcaaagggtctcagtcgaattcaatacggcaagtgcacacccaaa
gagctctcagttctcttgccagcgttcaacaaagtcgccattatcttccccgccatggac
aacgtctccgatgtcggcttcaagtcgccaatcttgaacgacataatcgcaaccttgcct
cgcctgcgcgaaccggtacaggagctgataagcatgatcgtgctcaaacgggctgcggaa
ggagacaaaacactgatgtggtcggattcggaaaagtatccagcgttggctgaagcagat
atgggcattcaggcggttgaaatggacctggccgatgaactgaagtctattaggcgtgtc
ctgaagaagcctgctctacagtggagttctagccggggagatgagtatctcgtcgaaata
ccgaaagccgaatcctccagagtgcctgctacttggcacttgatctccagtactagtaga
tttcgccgataccacagcccagtcgtcaaagccaaggtccaagaacgagcacaatttaaa
gaaatgctcgaagcagccgctaacgacgccttcaagtccttcctcaacgagatctctcaa
aatcactacgcccttctccgtgacgccgttaacaagctcgccatcgctgattgtcttatg
agcctggctctcgtcgcaatgaaaggagactacgtcaagcctgaattcacggatgaagtc
gacacacttgagatcatcgacggtcgacatccaggaggagaagagttgaagtcagaacca
tttgtgccgaattcggtgaccatgggccagggcggtcagcggagcaagatcatcacgggt
cctaacatgggaggaaagagttcgtccgtgaagatgattgctctcattgctataatggca
cagatagggtcgtacgtccctgcaaaggccgtcaaattgagcatgatggatagtattttg
acgaggatgggagcctccgacgagcttgcgcgtggacgttctacgttcatggtcgagatg
tctgagacgagtgacatcctgtcgcaggcaactagcaagagcctcgtcatccttgacgaa
cttggccgtggtacttccactttcgacggtatggccatagcgcaggcggccatgcaccac
cttgtgcaagtgaaaaagtgcaagacccttttcatcacccactatccgcttgtggcaacc
gaacttgagcgacgcttccctcaagaggtgcagaacctgcacatgggtttcagagaggaa
tctcgaattaacggcatccgggaaatatccttcctgtatcggctgactgaaggcttggcc
actgagtcctttgggattgagtgtggacgattagccggaatacccgaagaggtcctgcaa
gcctcagctgtccaagcggcgaaaatgcgtcggcaagtcgaggaacgtcacaggcgaaac
aagactcggaaagctgcccttttgttgcagcgctgtctgcaagcaccgtgcagcgacacc
ttagacaatcttcgagacgccatggattcgctgtcaacgacccagactaatatatag
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integrated database retrieval system
